Gene Ccel_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1862 
Symbol 
ID7310585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2215855 
End bp2217519 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content39% 
IMG OID643608793 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_002506190 
Protein GI220929281 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000194856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAAAC TTATAGAAAT TACTGTTGGT AGTTTACTTG ATGAAATGGC AAAGAGATAT 
CCCGATCATG ACTGTGTATT GTATACAGAT CGCCCATTCA GAAAAACTTA TTCTGAATTT
AATGAGCTTT GCAATAAGGT TGCAAAGAGT TTTCTCAAGT TGGGGATTAA GAAGGGCGAT
CATATTGCAA TTTGGGCAAC AAATATACCG GAATGGCTTA TTACACTTTT TGCCTCAGCA
AAAATAGGAG CAATTCTTGT TACTGTAAAC ACCAATTACA AAGTGTTTGA GGTTGAGTAT
TTGTTAAAAC AGTCCGATAC ACATACTTTG ATTTTGATGG ATGGTTTCAA GGATTCTAAT
TACATACAGA TCATAAACGA GCTGTGTCCT GACTTAAAGA ACTCCGAACC TGGGAATTTA
CATAATGAAA AACTGCCGTT TCTGAAAAAC ATTATAAGTG TCAGTAGCGA GAAGCATTCG
GGTATGTTTA GTTGGGAGGA TATCGTTGAT CTTGGTAATG ATATTTCTGA TGAAGAACTT
TATGCCATCA GTAATAGTCT TGACTGCCAC GATGTAATAA ATATGCAGTA TACTTCAGGA
ACTACAGGTT TTCCAAAGGG TGTAATGCTT ACACATTATA ATATCGTAAA TAATGGTAGG
TGCATTGGTG ACTGTATGCA TCTTACCCAC GAAGATAAAC TGTGTATTCC TGTTCCATTT
TTCCATTGCT TTGGATTGGT TCTGGCAATA ATGGCCTGCG TAACTCATGG AACATCTATG
GTTCCAGTTG ATTATTATTC ACCATTGAAG GTAATGAATG CCATTCAAAC AGAACGCTGT
ACAGCAGTGC ACGGGGTTCC TACAATGTAC ATAGCAATGC TGGAACATCC TGATTTTGAT
AAGTTTGATT TTTCTTCATT AAGAACGGGA ATCATGTCCG GCTCACCATG TCCTGTCAAG
GTTATGGAAG CTGTTATAGA AAAAATGAAC ATGAAGGATA TAACCATTCC TTATGGTCAG
ACAGAGTCTT CTCCTGTGTG TACACAAACC AGAATAGGTG ACAGTCTTGA ACTTAGGGTT
TCATCTGTGG GCCGTGCACT TCCATTCATT GAGTGTAAGA TAGTTGATCC TGAAACAAAT
CAGGACCTTC CTGACGGTGT TCCCGGAGAG TTTGTTGCCA GAGGGTACAA CATTATGAAG
GGATATTACA AGATGCCTGA GGCTACTGCA CAGGCTATAG ATGCTGATGG ATGGCTTCAT
ACAGGTGATT TGGCAACAAG GGATGAAAAC GGATATTACA AGATTACCGG CAGAATAAAG
GATATGATTA TCAGAGGCGG AGAAAATATA TATCCAAAGG AAATAGAAGA ATTTTTATAT
ACCTTGCCGG AAATTAAGGA TGTACAGGTA ATCGGTGTTC CGTCAAAAGT ATATGGAGAG
GAAATAATGG CCTGCATCAT ACTTAAAGAG GGTTGTAGCT TGACGGAAGA ACAGGTTAAA
GAAGCAGTAA AAGCCAATAT GGCAAGACAT AAAACTCCTA AATATGTTGG CTTTATGGAT
AGTTTCCCAA TGACTGCAAG CGGTAAAATT CAAAAGTACA AAATGCGTGA AAAAGCCATA
GCCGATCTGG GACTTCAGGA TGATGCTGCA ATAGAGACTG CATAA
 
Protein sequence
MEKLIEITVG SLLDEMAKRY PDHDCVLYTD RPFRKTYSEF NELCNKVAKS FLKLGIKKGD 
HIAIWATNIP EWLITLFASA KIGAILVTVN TNYKVFEVEY LLKQSDTHTL ILMDGFKDSN
YIQIINELCP DLKNSEPGNL HNEKLPFLKN IISVSSEKHS GMFSWEDIVD LGNDISDEEL
YAISNSLDCH DVINMQYTSG TTGFPKGVML THYNIVNNGR CIGDCMHLTH EDKLCIPVPF
FHCFGLVLAI MACVTHGTSM VPVDYYSPLK VMNAIQTERC TAVHGVPTMY IAMLEHPDFD
KFDFSSLRTG IMSGSPCPVK VMEAVIEKMN MKDITIPYGQ TESSPVCTQT RIGDSLELRV
SSVGRALPFI ECKIVDPETN QDLPDGVPGE FVARGYNIMK GYYKMPEATA QAIDADGWLH
TGDLATRDEN GYYKITGRIK DMIIRGGENI YPKEIEEFLY TLPEIKDVQV IGVPSKVYGE
EIMACIILKE GCSLTEEQVK EAVKANMARH KTPKYVGFMD SFPMTASGKI QKYKMREKAI
ADLGLQDDAA IETA