Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1862 |
Symbol | |
ID | 7310585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2215855 |
End bp | 2217519 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608793 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_002506190 |
Protein GI | 220929281 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000194856 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAAAC TTATAGAAAT TACTGTTGGT AGTTTACTTG ATGAAATGGC AAAGAGATAT CCCGATCATG ACTGTGTATT GTATACAGAT CGCCCATTCA GAAAAACTTA TTCTGAATTT AATGAGCTTT GCAATAAGGT TGCAAAGAGT TTTCTCAAGT TGGGGATTAA GAAGGGCGAT CATATTGCAA TTTGGGCAAC AAATATACCG GAATGGCTTA TTACACTTTT TGCCTCAGCA AAAATAGGAG CAATTCTTGT TACTGTAAAC ACCAATTACA AAGTGTTTGA GGTTGAGTAT TTGTTAAAAC AGTCCGATAC ACATACTTTG ATTTTGATGG ATGGTTTCAA GGATTCTAAT TACATACAGA TCATAAACGA GCTGTGTCCT GACTTAAAGA ACTCCGAACC TGGGAATTTA CATAATGAAA AACTGCCGTT TCTGAAAAAC ATTATAAGTG TCAGTAGCGA GAAGCATTCG GGTATGTTTA GTTGGGAGGA TATCGTTGAT CTTGGTAATG ATATTTCTGA TGAAGAACTT TATGCCATCA GTAATAGTCT TGACTGCCAC GATGTAATAA ATATGCAGTA TACTTCAGGA ACTACAGGTT TTCCAAAGGG TGTAATGCTT ACACATTATA ATATCGTAAA TAATGGTAGG TGCATTGGTG ACTGTATGCA TCTTACCCAC GAAGATAAAC TGTGTATTCC TGTTCCATTT TTCCATTGCT TTGGATTGGT TCTGGCAATA ATGGCCTGCG TAACTCATGG AACATCTATG GTTCCAGTTG ATTATTATTC ACCATTGAAG GTAATGAATG CCATTCAAAC AGAACGCTGT ACAGCAGTGC ACGGGGTTCC TACAATGTAC ATAGCAATGC TGGAACATCC TGATTTTGAT AAGTTTGATT TTTCTTCATT AAGAACGGGA ATCATGTCCG GCTCACCATG TCCTGTCAAG GTTATGGAAG CTGTTATAGA AAAAATGAAC ATGAAGGATA TAACCATTCC TTATGGTCAG ACAGAGTCTT CTCCTGTGTG TACACAAACC AGAATAGGTG ACAGTCTTGA ACTTAGGGTT TCATCTGTGG GCCGTGCACT TCCATTCATT GAGTGTAAGA TAGTTGATCC TGAAACAAAT CAGGACCTTC CTGACGGTGT TCCCGGAGAG TTTGTTGCCA GAGGGTACAA CATTATGAAG GGATATTACA AGATGCCTGA GGCTACTGCA CAGGCTATAG ATGCTGATGG ATGGCTTCAT ACAGGTGATT TGGCAACAAG GGATGAAAAC GGATATTACA AGATTACCGG CAGAATAAAG GATATGATTA TCAGAGGCGG AGAAAATATA TATCCAAAGG AAATAGAAGA ATTTTTATAT ACCTTGCCGG AAATTAAGGA TGTACAGGTA ATCGGTGTTC CGTCAAAAGT ATATGGAGAG GAAATAATGG CCTGCATCAT ACTTAAAGAG GGTTGTAGCT TGACGGAAGA ACAGGTTAAA GAAGCAGTAA AAGCCAATAT GGCAAGACAT AAAACTCCTA AATATGTTGG CTTTATGGAT AGTTTCCCAA TGACTGCAAG CGGTAAAATT CAAAAGTACA AAATGCGTGA AAAAGCCATA GCCGATCTGG GACTTCAGGA TGATGCTGCA ATAGAGACTG CATAA
|
Protein sequence | MEKLIEITVG SLLDEMAKRY PDHDCVLYTD RPFRKTYSEF NELCNKVAKS FLKLGIKKGD HIAIWATNIP EWLITLFASA KIGAILVTVN TNYKVFEVEY LLKQSDTHTL ILMDGFKDSN YIQIINELCP DLKNSEPGNL HNEKLPFLKN IISVSSEKHS GMFSWEDIVD LGNDISDEEL YAISNSLDCH DVINMQYTSG TTGFPKGVML THYNIVNNGR CIGDCMHLTH EDKLCIPVPF FHCFGLVLAI MACVTHGTSM VPVDYYSPLK VMNAIQTERC TAVHGVPTMY IAMLEHPDFD KFDFSSLRTG IMSGSPCPVK VMEAVIEKMN MKDITIPYGQ TESSPVCTQT RIGDSLELRV SSVGRALPFI ECKIVDPETN QDLPDGVPGE FVARGYNIMK GYYKMPEATA QAIDADGWLH TGDLATRDEN GYYKITGRIK DMIIRGGENI YPKEIEEFLY TLPEIKDVQV IGVPSKVYGE EIMACIILKE GCSLTEEQVK EAVKANMARH KTPKYVGFMD SFPMTASGKI QKYKMREKAI ADLGLQDDAA IETA
|
| |