| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1861 |
|---|
| Symbol | |
|---|
| ID | 7310584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2214454 |
|---|
| End bp | 2215758 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608792 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_002506189 |
|---|
| Protein GI | 220929280 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000268518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCT TAAATGATAT AGAAAAAAAA GTTCTGGTGT TTGACGGGTC TATGGGTATT
ATGCTTCAAA GCAAGGGACT TGAAGTGGGA ACTTGTCCTG AGGAGTGGAA TATTACTCAT
CCTGAAATGG TAAAGGAAAT ATATACTGCA TACCGTGATG CAGGAGCAAA CGTAATTCAG
TCAAATACCT TTCAGTCCAA TCTTATGAAA CTCTCTGAAT ATGGATTGCA GGACAAGCAT
TACGATATTA ATTTTGCAGG TGTTAGTCTT GCAAAGGAAG TAATGGGGGA TAAGGGCTAT
GTAGCTGCTT CCATAGGACC TTTAGGGAAA CTCTTGGAAC CATTCGGAGA ATTGACTTTT
GAGCAGGCCT ACAATACATT TAAGGAACAG GTTGTTGCTG TAACTGCCGG AGGTGCTGAT
ATTATTAGCT TCGAAACATT TACAGATGTA AGTGAAATGA GAATTGCCCT TTTGGCTTCT
AAAGAAAATT GTAACTTGCC TGTTATTTGT TCAATCTCCT ACGAGCAGAA CGGAAGAACG
CTTATGGGCT CAGACCCTGC TGTTTGTGCT TGCATTCTGC ACTCTCTGGG AGCTGACATG
ATTGGTACAA ATTGTTCTTT TGGACCGGAA TACATGATAA AGGTTGCTGA AAGCTACGGA
AAAACCGGAT TAAAATTTAG TATAAAGCCT AATGCCGGGA TTCCTAAAAC AGTGGACGGA
AATTTGGTGT ACGATGAAAC TCCTGAAAAA TTTGCTGAAT ATGCACAGGA ATTTATAAAA
TACGGAGCGA GACTTGTTGG AGGGTGCTGC GGAACAAGGC CCGAGTTTAT TGCAGAAATT
TCAAAGGCGG TTAGTGGATG TGATGCGGTA AGTTTTCCTT TGAATGTTGA TTTTATTACA
TCATCTTCTA AAGCTGTTGC TTTTTCTGAC ATAATGGGAG CTGGCATTGG ATGGATAGAT
ATTAATAAGG AGGAAACTCT AAAAAAGGAA CTTTTGGCAG GGAGCATATC TACAATTACG
GATGCTGCAA TGGACTTGAT GGAAGAGGAC TGCGAATTGA TAGCTATTGA TGTTGATGTA
CCCGGGGAAA ATGAATTGCT TCTATCCTAT GTAGTGAAGG AAGCCCAGAC TTATCTGAAA
CAGCCGTTTA TTTTAAAATC TAATAATCCC AGTGCTTTAG AGGCAGCCCT TCGAATTTAT
AAAGGAAAAG CTGGAGTTCT TACTAATAAC TCATCAGATG TAGCTGGAAT TATGAATAAA
TATGGAGCTG TGAATGTTGG AGGATTTATT TCAAATGAAA AGTAA
|
|---|
| Protein sequence | MSFLNDIEKK VLVFDGSMGI MLQSKGLEVG TCPEEWNITH PEMVKEIYTA YRDAGANVIQ
SNTFQSNLMK LSEYGLQDKH YDINFAGVSL AKEVMGDKGY VAASIGPLGK LLEPFGELTF
EQAYNTFKEQ VVAVTAGGAD IISFETFTDV SEMRIALLAS KENCNLPVIC SISYEQNGRT
LMGSDPAVCA CILHSLGADM IGTNCSFGPE YMIKVAESYG KTGLKFSIKP NAGIPKTVDG
NLVYDETPEK FAEYAQEFIK YGARLVGGCC GTRPEFIAEI SKAVSGCDAV SFPLNVDFIT
SSSKAVAFSD IMGAGIGWID INKEETLKKE LLAGSISTIT DAAMDLMEED CELIAIDVDV
PGENELLLSY VVKEAQTYLK QPFILKSNNP SALEAALRIY KGKAGVLTNN SSDVAGIMNK
YGAVNVGGFI SNEK
|
|---|
| |