Gene Ccel_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1849 
Symbol 
ID7312291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2199898 
End bp2201139 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content35% 
IMG OID643608779 
Productintegrase family protein 
Protein accessionYP_002506177 
Protein GI220929268 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCA TAAGACAAAG AGGAGAAAAC TCATTTCAGG TAACTGTTTC AAATGGATAC 
GATAGTAAAG GCAAAAAACT CTTAAAAACA AAGACAATAA ACATAGACCC TCGATTAACA
GAAAAACAGA GAGAAAAAGA ACTTCAAAAA CAAGTTGTAT TATTTGAAGA AGAAGTTAAA
TCCGGTTCTT ACTATGAACC AACTAAAATG ACTATGTCTG AATTTATTGA ATTATGGCTT
GATAAGAAGA AAAACAACAT TGAAAGTAAG ACACATCAAG GTTATTCCGG ACTTTTAAAA
GGTAGGGTTT TAAAAGTTAT GGGTGATACT AAGATAATAG ACTTAAAACC TCTTCATCTT
ATTAACTTTT ACGAGAATCT TCAAGAATTA GGCATCAGAG AAGATGGCCG GGAAGGAAAA
TTATCGACTA ATTCTATCTT GCACTATCAT AGAGCTTTAA ATGCCATGTT TGGTGATGGT
GTTCGTTGGG GGCTAATTAA AGAAAACCCA TGTTCAAAGG TTAGACCACC TAAAGTAGTG
AAAAAAGAAA TGAGCTGTCT TGACGAAGAC CAAATTCCCC AACTAATAAG CGCTTTATGC
AATGAACCTA TAGACATAAG CACTTTTATT ACATTAGACT TGGTAACAGG CTTAAGACGT
GGAGAGTTAT GTGGACTCCA GTGGGATAAT GTTAATTTAA AAGATAATAC AATAGTAGTA
GAACAGGCTG TAAGTTATAC CCCTGAAACC GGTACTATAA TAAAAACTCC GAAAACCAAG
TCATCTATTA GAAAGATTAC TATTCCTAAA ACAACAAGTG ACCTATTATC TATATATCGT
AAGTGGTGGC TTGAACAAAA AATAAAAGTA GGCGACCAAT GGCAAAAATC TGCTAGAGAA
GAGGTTGAAA AGAACGGACA AACATGGGAA GATCCTGAGT ATTTATTTAC TACTTGGGAC
GGTTACGTTA TGCATCCAGA CACTTTAACT AAAACTTTTA AAAAATTTAT TAAAAGAAAC
AATTTACCCG ATATAAGGCT CCACGACCTA AGACATACAG CTGCTACAAT GTTAATCCAT
GCAGGATTAA ACATCAGGGC TGTTGCCGCC AGAATGGGGC ATGAAAACCC CAACGTTACA
TTAGCAATAT ACTCACATGC CCTGCTCAGT GCAGACAAAC AAGCTGCTGA CGTAATGGGA
AATTTGATAA AAAAGAAACC CCAAAATGAA AAAGTTGAAT AA
 
Protein sequence
MASIRQRGEN SFQVTVSNGY DSKGKKLLKT KTINIDPRLT EKQREKELQK QVVLFEEEVK 
SGSYYEPTKM TMSEFIELWL DKKKNNIESK THQGYSGLLK GRVLKVMGDT KIIDLKPLHL
INFYENLQEL GIREDGREGK LSTNSILHYH RALNAMFGDG VRWGLIKENP CSKVRPPKVV
KKEMSCLDED QIPQLISALC NEPIDISTFI TLDLVTGLRR GELCGLQWDN VNLKDNTIVV
EQAVSYTPET GTIIKTPKTK SSIRKITIPK TTSDLLSIYR KWWLEQKIKV GDQWQKSARE
EVEKNGQTWE DPEYLFTTWD GYVMHPDTLT KTFKKFIKRN NLPDIRLHDL RHTAATMLIH
AGLNIRAVAA RMGHENPNVT LAIYSHALLS ADKQAADVMG NLIKKKPQNE KVE