Gene Ccel_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1809 
Symbol 
ID7310539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2163792 
End bp2164742 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content35% 
IMG OID643608741 
Productcellulosome protein dockerin type I 
Protein accessionYP_002506139 
Protein GI220929230 
COG category[S] Function unknown 
COG ID[COG5513] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.320363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA ATTACACACC AAAATCCAAG AGAGTTATAA GGTGTATGGC TGTTTTTATG 
TCTGTAGTTA TCTTTTTAAT TCTAATTGCT CCGGCAAAAG TAAACGCTGA AGCATCAAGT
GCTGATAATG AAGTGGTAGG AAGTTATACA CTTTTCGGAG ATCTCAATTG TGATAATAAG
GTCGATTCTA TTGATTATGC AAAAATGAAA ATAATATTAT TGGGAACAAC TGATCAGAGT
ACAGTCAATA TAAAAGCGGC AGATTTAAAT GGTGATGGAG ATGTTAATTC ATTAGATTTG
GCATTAATGA AAAAATTAAT CATGGGAGAG ATAATAACGT TCCCAGTTAA AACGAAATAT
CCAAGTACAG TTGATAACAG CAGTACGTAT CTTTTTCTTG ACGATTCTAA TAATACTTTT
AAAGTATCAT TAGAGGAAAA CGGATCAACG GGCTATCAGT GGGAATATAC CATATCGGAT
AATGCAGCAG CTAATTTGCT CTCAGTAGAT AGTTATTGCT TTACTCCCAA TCTTATTGGT
ACGCCAGTTC AAAAGGTATG GACTTTTAAG GCACTAAAAC CGGGCAAGTA TACAATTCAG
TTCACATATA GGCGGCCTTG GGAAACGGAT GTCCAACCGC TGAAAACCCT TAAATACGAT
ATATATGTAA GTTCTGTTAG TGGTACAATA AACATAAATC AAGATGATTC GTTTAAAATA
GCACTTATGG GCGGAGGAAT CTTTGGGGGT ACCTGGAAGT ACTCCAATAC TGATGAAACA
GCAATTTGTT TACTCAATAA AGAAATCATT GATGAAAAAC CGGGGATACC AGACTCCCTA
AATTTAACAG AATGGACATT CATTGCAGTG AAACCCGGAA ACTATAAGCT TATATTTGAA
GGGAGCTCAT TATATTCCGG CAAGGTCCAA TGTGAAATAA ATGTAATTTA A
 
Protein sequence
MEKNYTPKSK RVIRCMAVFM SVVIFLILIA PAKVNAEASS ADNEVVGSYT LFGDLNCDNK 
VDSIDYAKMK IILLGTTDQS TVNIKAADLN GDGDVNSLDL ALMKKLIMGE IITFPVKTKY
PSTVDNSSTY LFLDDSNNTF KVSLEENGST GYQWEYTISD NAAANLLSVD SYCFTPNLIG
TPVQKVWTFK ALKPGKYTIQ FTYRRPWETD VQPLKTLKYD IYVSSVSGTI NINQDDSFKI
ALMGGGIFGG TWKYSNTDET AICLLNKEII DEKPGIPDSL NLTEWTFIAV KPGNYKLIFE
GSSLYSGKVQ CEINVI