| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1800 |
|---|
| Symbol | |
|---|
| ID | 7310531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2154462 |
|---|
| End bp | 2155508 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643608732 |
|---|
| Product | heat-inducible transcription repressor HrcA |
|---|
| Protein accession | YP_002506130 |
|---|
| Protein GI | 220929221 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.478668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACTTG ACGATAGAAA ATTGAAAATA TTGCAAGCAA TAATAGATGA TTATATATAC
TCGGCTGAAC CTGTTGGGTC CAGAACTATT GCCAAGAAGC ATGAACTTGG TTTAAGTTCG
GCTACCATAA GAAATGAAAT GGCTGATCTT GAGGAAATGG GGCTTTTGGA ACAGCCATAT
ACATCAGCAG GCAGGATTCC TTCTGATAGA GGGTACAGGC TTTACGTTGA CCAGCTGATG
AAGATAGATG AATTGAACGA ATGTGAAATT GAAAAAATCC GAAGTGATAT GAACATAAGA
ATAAATGAAC TTAGTCAGCT AATTAGGAGT GCTTCGGCGG TTATGGCGAA AATTACCAAA
TATACTTCTA TGGCGGTATC ACCTCATATG AAAAAGAGTG TACTTAAATC TGTTCAGGTA
GTGCCGATAG AGTCGGGAAA GGCATTGGTA ATTATTGTTA CAGATGCAAA TATTGTAAGA
AATAACTTGA TCAGAATTCC TGAAAGTGTT ACTCCCGCTT TCTTGATTCA GATTTCAAAT
ATGCTTAACG AACAGCTTAA AGGGTTTACT CTGGAAATGC TGAAATCAGA CATTTTAAAT
GAAAAGTTTG AAAAACTAAC AGCATTACCT TTTAGGTTAA TAAAACCCAT TCTCGATGGA
ATAGAGGAAT TGATTATAAC TATTGATAAC CCAGAAGTAT ATCTTGAAGG TGCTACAAAT
ATTCTTAATT TTCCTGAGTT TAAAGAGGTT GATAAGGCTA AGGAGTTTTT GAATATATTA
GACGAAAAGA AACTTGTATC TGACCTTCTA ACGAATAGTG TAAATGATAA TAACGAAATA
ATTATTCACA TAGGAAATGA GAATGCTATG GAAGGTATAA AAGATTGTAG CTTGGTTACT
GCTTCGTACA GTGTCGGTAA TCATGTAATA GGAACAATAG GTATTATTGG CCCAACCAGA
ATGGAGTATT CTAGGGTTGT GTCATCTATG AACTATATAA GGAATAAAAT CAATCAGGAG
ATTCTTAAAC TTCTGGATAA TGGATAG
|
|---|
| Protein sequence | MLLDDRKLKI LQAIIDDYIY SAEPVGSRTI AKKHELGLSS ATIRNEMADL EEMGLLEQPY
TSAGRIPSDR GYRLYVDQLM KIDELNECEI EKIRSDMNIR INELSQLIRS ASAVMAKITK
YTSMAVSPHM KKSVLKSVQV VPIESGKALV IIVTDANIVR NNLIRIPESV TPAFLIQISN
MLNEQLKGFT LEMLKSDILN EKFEKLTALP FRLIKPILDG IEELIITIDN PEVYLEGATN
ILNFPEFKEV DKAKEFLNIL DEKKLVSDLL TNSVNDNNEI IIHIGNENAM EGIKDCSLVT
ASYSVGNHVI GTIGIIGPTR MEYSRVVSSM NYIRNKINQE ILKLLDNG
|
|---|
| |