Gene Ccel_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1775 
Symbol 
ID7310509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2130871 
End bp2134320 
Gene Length3450 bp 
Protein Length1149 aa 
Translation table11 
GC content39% 
IMG OID643608708 
ProductATP-dependent nuclease subunit B 
Protein accessionYP_002506106 
Protein GI220929197 
COG category[L] Replication, recombination and repair 
COG ID[COG3857] ATP-dependent nuclease, subunit B 
TIGRFAM ID[TIGR02773] ATP-dependent nuclease subunit B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTTC AATTTATTTA TGGAAGGGCA GGTTCTGGAA AATCCTTCCA TTGTTTGAAT 
TCAATAAAAA CTAAACAAAA TAAAGATAGT AATAAAAAAC TTGTACTAAT TGTACCGGAG
CAGTATACAT TGCAGGCGGA ACGTGACTTG ATAAAGGTTC TTGGAACCGG GGGGATTTTA
AAAACTGAGG TCCTGAGCTT TAGAAGAATG GCATACAGGG TTTTAAATGA GGTTGGAGGA
ATTACTTACC CTCATATACA TCCGTCTGGA AAGAACATGA TTATATACCG CATTTTGGAA
AGACTAAAGG ATCAATTTAC TATATTTCAT AAGTCTGCCA ATTGCAAGGG CTTTGTAAAT
ACACTTTCAA CACTTATAAC CGAGCTTAAA AGGTATAATG TAAGAGCCGA AAGTTTCGAC
GAAGTTTTAC AAGGACTTGC CGACGACAAT TACCTATCAC ACAAGCTTAA AGAAATAAAA
CTTATATATA GTGAATTTGA CAGTATGCTG GTAGATCGGT ACAGGGATAC GGACGATGAA
TTGACATTAT TATCTTCAAA ATTAGAAGGT ACTGAAATAT ATGCTAAATC CGAAATATGG
ATTGACGGTT TTGCAGGATT TACGCCCCAG GAGGTTGAGG TAATATCAAA GCTCATCCAA
CAGGCTGAAA ATGTTCACAT AACTATGTGT ACTGATATTC TTTTTGATGA TGTACAGGCA
GACTTAACAG ATGTTTTTGC AGCAGTAAAA AAATCCTGCA AAAAATTTGT AAGTATTGCG
GAATCTTACG GTGTAAAAAT ACTTCCGCCT GTCTGTTTAA ACACCCCAAA CCTGCCAAGG
TTCAAAGACA GCAGGGAACT TCAGAGCCTT GAAACTAATT ATTGTTCTTA TTCCTACAGG
GCCTATCAGC TGCCTACACA GGATATAGAG CTTTTTGAAT CAGTAAATAT TTATACTGAA
ATCGAGGAAT GTGCAAGAGA TATTATCAAG CAATGCCGTG ACAATGGTAT GCAGTTCAAG
GACATAACTG TTGCCACAAG AAATCTTACG GGATATGAAA ATCTAATAGG TGTTATTTTT
GAACAATACA ATATACCATG TTTTATAGAT TCCAAAACCG AAATAACCAA TCATCCGCTG
GTTAGAATGG TTCTTTCAAT GCTGGAGATA TTTACTGAAA ACTGGTCCTA TGAGTCGGTA
TTCAGATATC TCAAGTCAGG TCTGACGGGA ATTGATAATA CTAAAATAGA CATACTGGAA
AACTACGTTC TTGCATGCGG TATCAGAGGG AGCCGCTGGA CTCAGGAGGC TGACTGGAAT
ACAAGTATTG AATTCAGGCC GGACGATGGA CAAAAGCCGG AAAATGATGA AATGCTTCTT
AATATAAATA AGACCAGAAA TGAAATTCGG GAACCTCTTA TTCGTTTCAG AAACAGGACA
AAGGGAAGAA GAACCGCAGG AGATTTTTGT GCAGGAATTT ACGAATATCT GGTTGAAATC
GGTGTCGAAC AGAGAATACG GAATTATATA GAAAAATTTA CTCAAAGCGG ACAGTTAAGG
CTGGCAGGTG AATACCAGCA GGTCTGGAAC ATACTAATGG ATGTTTTTGA TCAGGCGGTA
GAAGTAATGG CTGACGAAAC CTTTGGGCTT GAAAAATTTG CCAATGTATT TAAGATTGGA
CTGGCTGAAT ACAAGATTTC GTCTATTCCG GCATCCCTTG ACCAGGTTTT GGTGGGAAGT
ATTGAGCATA TAAGAAGCCA CGAAATAAAA GCACTGTACA TTCTAGGAAC CAATGATGGA
GTATTTCCTT CCGCTGGGAT GAGCGAAGGG GTTTTGTCGG ATGCAGATAG AGAAGTACTT
GACAAAAGAG GTATTGAACT GGCCAGTGAT ACAAAAACCA GAGCATTTGA CGAGCAGTAT
CTGATATATA GAACATTGAC CACGCCAAAA AACTATTTAA GACTGAGTTG GCCTATTGCT
GACCATGAAG GAAGAACTAT GCGTCCTTCC ACAATTATTT CGAGGATGAG AAAGATATTT
CCAAAAGTTA CAGAAAAAAG CAATATCGTA AAACCGTCTG CTGATAAGCA GCATATCGAT
TTAATAGCAT CGCCTATACC TGCCTTTAAC CAGTTGGTTT GTGCATTAAG ACAGAAAAAT
GAAGGGATAG AGCAGGGTGA AATATGGAGG GAAATATTTG CATGGTTTTC AGGTCAGGAC
GAATGGAAGC AAAAGTGCGA TGCAATGATT AATGCATTGA AATACAGAAA TATAGCTGCC
CCGGTGGATA AATCAAAGAT ACGTGAGTTG TATGGGAAAA GTCCGTATTT TACAGTTTCA
AGGCTGGAAA AGTATACATC ATGTCCCTTT GCATTTTATG TGCAATACGG CCTGGGAGCT
AGGGAAAGAA AGATATATCG TATGAGTCCG CCGGATGTTG GAACCTTTAT GCATGCAGTA
ATAGAAAGAT TTTCAAAAAT GGTAGATGAA AACAATTATT CGTGGAGGGA ATTTGACAGG
CAATGGTGCA GTGAACAGGT TTCAAAAATC GTGGATGAGC TTTTGGACAG CATGAAAAAC
ACCATACTTG GAGGCTCAAA AAGATTCAAG GCTCTAGCCG TAAGACTAAA AAGAGTTGTT
ACAAGAGCTG TATGGCTTAT CACAGAGCAT ATAAGGCGGA GCAGCTTTGA ACCGGTGGGG
TATGAGGTGG ACTTCGGAGA TGGCGGAGCA TATCCTCCCA TGGTCATTGA ATTAGATTCA
GGTGAAAAGA TAAGGCTTGT GGGCAGAATT GACAGAATTG ATGCTTTGAG AGCAGAAAAT
GGAACATATC TAAGGATAGT AGATTATAAA TCCGGAGAAA AGGATTTTAA ACTAAGCGAT
GTCTATTATG GTCTTCAAAT GCAGCTTATT ACCTATCTGG ATGCACTATG GGAATACTCG
GACAAAAGTA ATGGTGAAAA GATTATACCG GGAGGAATTT TGTATTTTAG GATTGATGAC
CCAATGATAA GATGTACTGA CAACAGTACC CCGGAAGAAA TAGAAACTGC CATAATGAAA
AAGCTTAAAA TGAAAGGACT TCTCCTTGCG GATGTTCAGC TTATTAAATA TATGGACAAT
ACAATTGAAG GGAACTCCAT CATTATTCCT GCAAGGATAA ATAAGGGAGA TGTTTTGGGG
AAATCCTCTG CTGCAACCAT TGAACAGTTT ACAGTTTTAA GAAGCTACGT AAAGCAGCTT
TTGAAAGACA TGTGCAGCGA ACTTATGAAG GGGAATGTTC CAATAAGTCC ATACAAAAAG
AAAAAGTTAA CTTCCTGCAG CTACTGCAAT TATTCATCAG TATGTCAGTT TGATCAGTCC
CAAAAGGAAA ACAGTTTCAG GATGCTGCAC GACAGAGAAG ACAATGACAT ATGGAAACTT
ATGAATGAAA TTGACGTAAA AGATAATTAA
 
Protein sequence
MGLQFIYGRA GSGKSFHCLN SIKTKQNKDS NKKLVLIVPE QYTLQAERDL IKVLGTGGIL 
KTEVLSFRRM AYRVLNEVGG ITYPHIHPSG KNMIIYRILE RLKDQFTIFH KSANCKGFVN
TLSTLITELK RYNVRAESFD EVLQGLADDN YLSHKLKEIK LIYSEFDSML VDRYRDTDDE
LTLLSSKLEG TEIYAKSEIW IDGFAGFTPQ EVEVISKLIQ QAENVHITMC TDILFDDVQA
DLTDVFAAVK KSCKKFVSIA ESYGVKILPP VCLNTPNLPR FKDSRELQSL ETNYCSYSYR
AYQLPTQDIE LFESVNIYTE IEECARDIIK QCRDNGMQFK DITVATRNLT GYENLIGVIF
EQYNIPCFID SKTEITNHPL VRMVLSMLEI FTENWSYESV FRYLKSGLTG IDNTKIDILE
NYVLACGIRG SRWTQEADWN TSIEFRPDDG QKPENDEMLL NINKTRNEIR EPLIRFRNRT
KGRRTAGDFC AGIYEYLVEI GVEQRIRNYI EKFTQSGQLR LAGEYQQVWN ILMDVFDQAV
EVMADETFGL EKFANVFKIG LAEYKISSIP ASLDQVLVGS IEHIRSHEIK ALYILGTNDG
VFPSAGMSEG VLSDADREVL DKRGIELASD TKTRAFDEQY LIYRTLTTPK NYLRLSWPIA
DHEGRTMRPS TIISRMRKIF PKVTEKSNIV KPSADKQHID LIASPIPAFN QLVCALRQKN
EGIEQGEIWR EIFAWFSGQD EWKQKCDAMI NALKYRNIAA PVDKSKIREL YGKSPYFTVS
RLEKYTSCPF AFYVQYGLGA RERKIYRMSP PDVGTFMHAV IERFSKMVDE NNYSWREFDR
QWCSEQVSKI VDELLDSMKN TILGGSKRFK ALAVRLKRVV TRAVWLITEH IRRSSFEPVG
YEVDFGDGGA YPPMVIELDS GEKIRLVGRI DRIDALRAEN GTYLRIVDYK SGEKDFKLSD
VYYGLQMQLI TYLDALWEYS DKSNGEKIIP GGILYFRIDD PMIRCTDNST PEEIETAIMK
KLKMKGLLLA DVQLIKYMDN TIEGNSIIIP ARINKGDVLG KSSAATIEQF TVLRSYVKQL
LKDMCSELMK GNVPISPYKK KKLTSCSYCN YSSVCQFDQS QKENSFRMLH DREDNDIWKL
MNEIDVKDN