Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1762 |
Symbol | |
ID | 7310495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2109728 |
End bp | 2110786 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643608691 |
Product | peptidase M42 family protein |
Protein accession | YP_002506093 |
Protein GI | 220929184 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.903048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTT CAAATTGTTT AGAGTATTTG TCAGGACTTG TGGCAGTAGC AGGCTTTGAA GCAAGTGCTG CGGCAAAAAT CGCAGAAACC TTTAGGGATT ACTGCGATGA AGTCCGAATA GATAAGTTTT TTAATGTAAT TTTCCTGAAA AAGGGTTTTA ATAAGTCTGC AAAAAAGATT TTGATTACAG CACACATTGA TGAAATAGGC TTTCTGGTCA ACTCAATAGA CGATAAAGGG TTTATCGGTA TAAGCCCAAT TGGAGGAATA GACAGCAAAA TACTGCTGGC ACAGGAAGTA ATAATCCATG GCAGTGAGGA TATCCCCGGC ATAATAGGGG CAATGCCGCC GCACCTGATG AAACAGGAGG ATGCTGGAAA GGCTGTAAAA ATAAAGGATT TACGTGTTGA TACAGGACTA AAGGGGGAGG AACTTAAAAA AATCGTTTCA ATAGGAGATG TTGTGTCCCT TAAATCAAGC TTCTCTTTAA TGAACAAAAA CAAAGCCAGC GGAAAGTCTT TTGACAATCG TACAGGTATT GTCTGTATGA TGGAAATATT ACGGGGCCTA AAGGATATTA ATCATGAAAA TGATATTATA TTTATGGCTT CAACACAGGA AGAAACAAGC CTTGTGGGGG TTACTACAGC AGCTTTTGCA TTAATGCCGG ATGCTGCAAT AGTAATTGAC GTATGCCATG GAGATATCCC TGAGCTTTCA AAGGGTATGT CCTCAACACC CGGCAAAGGG CCGGAGATAT CAATAGGCCC TAACCTTCAT AAAGGGATGG TAGAAAAGAT GTTTGAGCTT GCTAAAGACA TATGCATTCC ATTTCAGAAA ATGGTTGAGT CAGGCGATAC GGGGACTGAA GCATGGGCAA CTCAAGTCAG TGGCTGCGGA ATACCCACTG CTCTGCTTTC TATCCCGGTC AGGTACATGC ATACGGCTGT AGAAACGGTA AATTTGGACG ATATAAAATT TGCGGCCAGA ATAATAACTG AGTTCGCCAG GCTGAGCAGT GAGAAATTAG AGACTCTTCT GGAATGGAAG AATATCTGA
|
Protein sequence | MEISNCLEYL SGLVAVAGFE ASAAAKIAET FRDYCDEVRI DKFFNVIFLK KGFNKSAKKI LITAHIDEIG FLVNSIDDKG FIGISPIGGI DSKILLAQEV IIHGSEDIPG IIGAMPPHLM KQEDAGKAVK IKDLRVDTGL KGEELKKIVS IGDVVSLKSS FSLMNKNKAS GKSFDNRTGI VCMMEILRGL KDINHENDII FMASTQEETS LVGVTTAAFA LMPDAAIVID VCHGDIPELS KGMSSTPGKG PEISIGPNLH KGMVEKMFEL AKDICIPFQK MVESGDTGTE AWATQVSGCG IPTALLSIPV RYMHTAVETV NLDDIKFAAR IITEFARLSS EKLETLLEWK NI
|
| |