Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1751 |
Symbol | |
ID | 7310486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2097733 |
End bp | 2098617 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643608680 |
Product | tyrosine recombinase XerD |
Protein accession | YP_002506082 |
Protein GI | 220929173 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGCTA ATGTTGAAAA GTTTATTAAT TTTCTAGAGA GAGATAAGAG ATTATCGCTC AATACGCTTC AGTCCTATAA GCGGGACATA GAACAATACA TAACATACTT GAAAGAAATT AATGTAACCA ACATCGTAAA TACTAATAAG ACAACTGTAA TTGCCTACTT GTTACATTTA CAGAAAAAGG GTAGAGCTAC ATCTACCATA TCTAGGAACC TTGCATCCAT AAGGTCCTTT TATCAATTCC TCTATAAGGA TAAAGTTATT GACAATGACC CTACCTCAGA GTTGGAATCA CCTAAAGTAG AAAAAAAGCT TCCTCAGATA TTGTCAACCC AAGAGGTCGA GTTGCTTCTC GATCAGCCTA AGTGTCTTGA TCTTAAAGGA ATTCGTGACA AGGCTATGCT TGAATTGTTG TACGCAACAG GAATTCGTGT TTCAGAACTT ATATCACTAA ATTTAGATGA TATAAATTTT GACCTCGGGT TGATTAAATG CAACAAAGGA ACACGTGAAA GAACAATTCC CATCGGATCC ATATCAACAG CCGCGGTACA CGAATATCTA GAGAAATCCC GTAATTTTTT GATACAGGAC AGTCAGGAAA TAGCACTTTT TGTAAATGTA AACGGTAAGA GACTGACAAG ACAAGGCTTC TGGAAAATCA TAAAGCATTA CAAAAATCAA GCCAAAATAA ATAAGGACAT TACACCACAT ACATTAAGAC ATTCCTTTGC GGCACATTTG CTTGAAAATG GTGCGGATCT AAGGTCAATA CAGGAAATGC TGGGTCATTC AGATATTTCT TCAACTCAGA TATATGCACA GATAGCTAAA AACAAAATTA AAGATGTTTA CAAAAAAACT CATCCCAGAG CATAA
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Protein sequence | MEANVEKFIN FLERDKRLSL NTLQSYKRDI EQYITYLKEI NVTNIVNTNK TTVIAYLLHL QKKGRATSTI SRNLASIRSF YQFLYKDKVI DNDPTSELES PKVEKKLPQI LSTQEVELLL DQPKCLDLKG IRDKAMLELL YATGIRVSEL ISLNLDDINF DLGLIKCNKG TRERTIPIGS ISTAAVHEYL EKSRNFLIQD SQEIALFVNV NGKRLTRQGF WKIIKHYKNQ AKINKDITPH TLRHSFAAHL LENGADLRSI QEMLGHSDIS STQIYAQIAK NKIKDVYKKT HPRA
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