Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1726 |
Symbol | murD |
ID | 7310466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 2073796 |
End bp | 2075193 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608654 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_002506057 |
Protein GI | 220929148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA AGCTGGAACA GTTTAAGAAA GACGTTAAAA ATAAAAGGGT TGCTGTCATG GGAATAGGAG TAAGCAATAT TCCTTTGATT AAATATCTTG TAAGTTTCGG TGTTGATGTA ACTGCTTTTG ATAAGTCAAC GGAAGAAAAA CTTACTGATG CTTTTAATGA ATTAAAGGGA TTGCCTGTTA AATATAGCCT TGGCCCTGAT TATCTTTCCA GACTGAACGG ATTTGATATG ATTTTTCGTA CACCTGGAAT GAGACCTGAT TTGCCTGAAC TTGTTGAGGC TGTTGCTAAT GGTGCGGAGC TTACATCGGA AATGGAAGTT TTTCTAAAGC TATGTCCTGC ACAGGTTTTT GCAGTTACAG GTAGTGATGG TAAGACCACT ACCACAACTT TGATTTATAA AACACTGTCA GAGGAAGGCT TTAAATGCTG GCTTGGAGGG AATATAGGGA CACCGCTTCT AAGCAAAATA GATGATGTTG CAGAAACTGA CAAGGTAATA TTAGAGCTAA GCAGTTTTCA GCTAATGACA ATTAAAGACT GTCCGTCAGT TGCCGTTATA ACCAATATTT CGCCAAACCA CCTTGATGTT CATAAATCCT TGCAGGAATA CATTGATGCA AAGAAAAACA TTTTTATTAA CCAAAATGAA AATGATAAGC TCGTTCTCAA TTTTGACAAT GAAATTACAA AGAGCTTTAA CTATGAAGCT CGTGGAGAGT ATGTTTATTT TTCAAGATTA AATAACATTA ATGAAGGTGT TGTATATCAA AATGGCAGGA TTATTGTTAA GAAAGAAAAC AGCATAACTG AAATAATTGA AGGAGATAAA ATTAAAATTC CCGGAGTTCA TAACATAGAG AATTATATGG CTGCCACTGC TGCAACCATA GATTATGTGA AGCCGGAAAC AATCGCAAGG ATTGCATCTT CATTTAATGG TGTTGAGCAT CGGATAGAAT TGGTAAGGGA GCTTAATGGG GTTAAGTTCT ACAACAGCTC CATTGACAGC AGCCCTTCAA GAACAATAGC TGCATTAAAA ACCTTCAAGG ACAAGGTTAT ACTCATAGCT GGAGGAAAGG ACAAGGGGAT ACCATACGAC TCAATGGGTG AAATCATCAC CGAGAAGGTA AAATGTCTGC TGCTAATAGG TGCTACTGCT TCAAGAATTG AAGAAGCATA TAAGAATTAC CTGCAGCAAA GGGACTTGGA AAACGATATA AAAATCATAC ACTGTGATAC TTATCAGGAA GTTGTTCAAA AGGCACATGC AGAAGCCGAA CAGGGTGACT GTATAATTTT ATCGCCTGCA AGCACAAGCT TTGATATGTT TAAAAATTTT GAACATCGTG GGAATGTATT TAAAGAATTG GTGAATAACC TTAAATAG
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Protein sequence | MNNKLEQFKK DVKNKRVAVM GIGVSNIPLI KYLVSFGVDV TAFDKSTEEK LTDAFNELKG LPVKYSLGPD YLSRLNGFDM IFRTPGMRPD LPELVEAVAN GAELTSEMEV FLKLCPAQVF AVTGSDGKTT TTTLIYKTLS EEGFKCWLGG NIGTPLLSKI DDVAETDKVI LELSSFQLMT IKDCPSVAVI TNISPNHLDV HKSLQEYIDA KKNIFINQNE NDKLVLNFDN EITKSFNYEA RGEYVYFSRL NNINEGVVYQ NGRIIVKKEN SITEIIEGDK IKIPGVHNIE NYMAATAATI DYVKPETIAR IASSFNGVEH RIELVRELNG VKFYNSSIDS SPSRTIAALK TFKDKVILIA GGKDKGIPYD SMGEIITEKV KCLLLIGATA SRIEEAYKNY LQQRDLENDI KIIHCDTYQE VVQKAHAEAE QGDCIILSPA STSFDMFKNF EHRGNVFKEL VNNLK
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