Gene Ccel_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1713 
Symbol 
ID7310454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2060700 
End bp2062094 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content36% 
IMG OID643608641 
Producthistidine kinase 
Protein accessionYP_002506044 
Protein GI220929135 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.529234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCA GTTTAAGAAC CAAGCTTTCA ATTTCCTATG TTATGATAGC ATTAATATGT 
ATATTGCTTA TAAGCATATT TACAACATTA TTTATACACA AACACTTTGA AGAATATGTA
AAACAAAATA CTGAACATAA AAACAGGGAA ATTGTTACTA CACTTGCAGG CCAGTATATG
GACAACGGAC AGTGGAATTC CAAAGTAATA GAAACTATCG GTATAAGTTC GTTGGAGAAT
GGGATTATTT TAAGAGTCAG AGACATTTAC GGTAATATTA TATGGGACGC GAGAGCCCAT
AACAACGGTA TGTGTCAAAG GATAATAGAG CATATGTCCC AAAATGCAAG TAAAATACCT
GGTGGAGAAA AAGCGGTTTA TACAGAGGTT CCATATTCTA TAAACCACAA CCTGAAAAAG
ATAGGTACTG TAGAAATTGG AACATATGGA GACAATTATC TTAATGAGCA TGACATTGCA
TTTATTAATG ATTTATATAA ATTACTTTGG GCTGTGGGAC TTTTTTCCTT GATTCTCTCT
TTATTATTCG GAACAGTCAT GTCAAAAAGA CTGGTTTCGC CCATAGCAAG GGTAATAAAT
ACCGCAAAAT CCATATCGAA AGGCTTTTAT TCAGACAGGA TTACAGAAAA ATCAAATACC
AGAGAAATAA ATCAGCTTAC GGTTAGCATA AATGATCTTG CAGAGAACAT GGAAAAGCAG
GAAACACTAA GGAGAAGGCT TACCGGTGAC GTTGCACATG AACTGAGAAC ACCCCTAGCA
ACTCTTCAGA GCCATATGGA AGCAATGATA GACGGAATAT GGTCAGCGGA TTCGGAAAGA
CTTAAAAGCT GTCATGAAGA AATTGTAAGA ATAAGTAAAA TGGTAGGCGA TCTGGAAAGG
CTTGCAAAGT ATGAAAGTGA AAATATTACA CTGAACATGG ATACATTTGA TATTACCAAG
TTGGCAAAAA GGCAGGTTCA GAATTTTGAA ACTGAGTTTT TATGTAAAGG GCTGGAATTG
GAACTTACAG GTCCAAGTTG CCTGGTGTAT GCTGATAAGG ATAAAATAAG TCAAGTATTT
GTAAATTTAC TCTCAAATGC TCTGAAATAT ACTCCCAAAG GAGGATCGGT CGAGTTGCAT
ATTCAGGATA ATAATAATTT TATCGAGATT TCTGTAGAGG ATAACGGCCT AGGTATACCA
GAAGAAGATT TACCTTACAT TTTTGAGAGG TTTTACAGAG CTGATAAGTC ACGGGACAGG
CTGACAGGCG GCTCGGGAAT AGGCCTTACT ATATGTAAAT CAATTGTTTT GGCTCACGGC
GGTGATATCT ATGCACAGAG CAACCCAGGT AAAGGTACCA AATTTATTTT TACTGTTCCG
AAACTTCTTA AATGA
 
Protein sequence
MSSSLRTKLS ISYVMIALIC ILLISIFTTL FIHKHFEEYV KQNTEHKNRE IVTTLAGQYM 
DNGQWNSKVI ETIGISSLEN GIILRVRDIY GNIIWDARAH NNGMCQRIIE HMSQNASKIP
GGEKAVYTEV PYSINHNLKK IGTVEIGTYG DNYLNEHDIA FINDLYKLLW AVGLFSLILS
LLFGTVMSKR LVSPIARVIN TAKSISKGFY SDRITEKSNT REINQLTVSI NDLAENMEKQ
ETLRRRLTGD VAHELRTPLA TLQSHMEAMI DGIWSADSER LKSCHEEIVR ISKMVGDLER
LAKYESENIT LNMDTFDITK LAKRQVQNFE TEFLCKGLEL ELTGPSCLVY ADKDKISQVF
VNLLSNALKY TPKGGSVELH IQDNNNFIEI SVEDNGLGIP EEDLPYIFER FYRADKSRDR
LTGGSGIGLT ICKSIVLAHG GDIYAQSNPG KGTKFIFTVP KLLK