Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1693 |
Symbol | |
ID | 7310436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 2038007 |
End bp | 2038654 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643608621 |
Product | SOS-response transcriptional repressor, LexA |
Protein accession | YP_002506024 |
Protein GI | 220929115 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.026271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA AGAATTCTAA CAAACAACAG GAAATTCTTG ACTATGTTTA TAAATGTGTT CATGAAAACG GTTACCCGCC TTCTGTAAGG GAAATATGTT CTGCTGTAGG TTTTAAGTCT ACTTCTACGG TACATTCCTA TTTGCAAAAG CTTATAGATA AAGGACATCT TCAAAAGGAC CCTACCAAAC CTAGAGCAAT TAAAATTCTA AATAAAACAA GTCAGGTTCA GGAAAACCGC ACTAATAAAG AAGGATACTA TACCTCCCGT GAAATGGTGG ATGTTCCTGT CGTGGGAAGG GTTACAGCAG GTCAGCCTAT TCTGGCTGTT GAAAATATCA CCGATACTTT TCCACTGCCA GTAGATTTCG TCCAAAATAG TGATGCATTT ATGCTGAGAA TTCAAGGAGA AAGTATGATA GATGCAGGAA TCCTTGACAA GGACTTTGTA TTGGTAAGAC AGCAGTCATC GGCCAATAAT GGTGACATTG TTGTAGCTTT GATTGGAGAT GAAGCTACAT GTAAAACCTT TTACCGCGAA AAAGATCATA TAAGGCTTCA ACCGCAGAAT AGCAGTATGG AACCCATTGT TGTAAAAGAT GAGTTGTCAA TTCTAGGAAA AGTAATTGGT GTATTCAGAC GCATGTAA
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Protein sequence | MAKKNSNKQQ EILDYVYKCV HENGYPPSVR EICSAVGFKS TSTVHSYLQK LIDKGHLQKD PTKPRAIKIL NKTSQVQENR TNKEGYYTSR EMVDVPVVGR VTAGQPILAV ENITDTFPLP VDFVQNSDAF MLRIQGESMI DAGILDKDFV LVRQQSSANN GDIVVALIGD EATCKTFYRE KDHIRLQPQN SSMEPIVVKD ELSILGKVIG VFRRM
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