| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1692 |
|---|
| Symbol | |
|---|
| ID | 7310435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 2037500 |
|---|
| End bp | 2037790 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643608620 |
|---|
| Product | Peptidoglycan-binding LysM |
|---|
| Protein accession | YP_002506023 |
|---|
| Protein GI | 220929114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000329213 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAA AAAAATATGT TTTAAAAGAT AAAAAAAGAT TTTTCAGTTT TTTGTTTTTT
AGTCTATTTC TTACATTTAC TCTGGTTTAT ACAGTCTCAG TCGCAGGTTT TACTGAAAAA
AAGTACATTT CCGTTACGGT AGAGAAGGGT GATTCCTTAT GGTCTATAGC CTCGAAGTAC
GGTGGCAATA CCGATATCAG AAAGAAGATA TACTTAATAA AGAAGATAAA TCATATGGAT
TCAAGTGACT TATCTGAGAA CGCCTCTATC CTTGTACCTG TTAACAAATA A
|
|---|
| Protein sequence | MARKKYVLKD KKRFFSFLFF SLFLTFTLVY TVSVAGFTEK KYISVTVEKG DSLWSIASKY
GGNTDIRKKI YLIKKINHMD SSDLSENASI LVPVNK
|
|---|
| |