Gene Ccel_1680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1680 
SymbolglyA 
ID7310424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2023483 
End bp2024721 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content39% 
IMG OID643608608 
Productserine hydroxymethyltransferase 
Protein accessionYP_002506011 
Protein GI220929102 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAATA TTGATACGAT AAAGAAGATT GATTCTCAAT TAGCAGAAGC TATTGAGTTA 
GAAGTCAACA GACAGAGAAA TAAAATAGAA TTAATTGCTT CAGAGAATTT TGTAAGTGAT
GCTGTTATAG AGGCACTTGG AACACCCTTA ACAAATAAAT ACGCGGAAGG TTATCCTGGA
AAAAGATATT ATGGCGGATG CGAATATGTA GATATAGTTG AACAACTTGC TATTGACAGA
GCAAAGCAGA TTTTTGGTGC AGAACATGCA AATGTTCAGC CTCATTCTGG AGCACAGGCA
AATACAGCTG TTTACTTTGC TTTTCTAAAT CCCGGAGATA CAATTCTGGG AATGAACCTT
GCACACGGGG GACATTTAAG CCATGGCAGT CCCGTTAACA TATCCGGTAA GTACTATAAG
GTAGTACCAT ACGGTGTAAG AGAGGACAAC TGCTACATTG ATTATGATGA GTTGAGAAAA
ACCGCTAAGG AAAACTCACC CAAAATAATT GTAGCAGGAG CAAGTGCATA TCCAAGAATA
CTAGATTTTA AGGCATTCAG GGAGATTGCT GATGAAGTTG GAGCAATTCT AATGGTTGAT
ATGGCTCACA TAGCAGGTCT TGTTGCTGCC GGAGTGCACC CAAGTCCTGT TCCATATGCT
GACGTTGTAA CAACTACAAC TCACAAGACA TTAAGAGGCC CAAGAGGCGG TATGATTCTC
TGCAAGCAGG AATATGCCAA GAAAATCGAC AGTGCTGTGT TCCCTGGGAA TCAGGGTGGT
CCATTGATGC ACGTTATTGC CGCTAAAGCA GTAAGCTTTA AGGAAGCTCT TACTGATGAT
TTCAAAATAT ATCAGCAAAA CATTGTAAAA AATGCAAAAG CTTTGGCTTC TGCTCTTATG
GAAAAGGGCT TTAAGCTAGT TTCAGATGGC ACCGACAACC ACCTTATGCT TATTAACCTG
ACAAATATGA ATATTACGGG TAAGGAAGCA CAGCATAAGT TAGATGAGGT CTGCATCACA
TGTAACAAAA ACGGTATTCC TTTTGATACT CAGAGTCCAT TTATTACAAG CGGTATAAGA
CTTGGTACTC CGGCTGTAAC AAGCAGAGGA ATGAATGAGG AAGATATGAA AGAGATTGCA
GACTTAATTC ATCTCACAAT TTCAGATTTT GAAAATTCAA GGACGAATAT AATAAGAAGA
GTTGAGGCTC TTTGTAATAA ATATCCTTTA TATGAATAA
 
Protein sequence
MYNIDTIKKI DSQLAEAIEL EVNRQRNKIE LIASENFVSD AVIEALGTPL TNKYAEGYPG 
KRYYGGCEYV DIVEQLAIDR AKQIFGAEHA NVQPHSGAQA NTAVYFAFLN PGDTILGMNL
AHGGHLSHGS PVNISGKYYK VVPYGVREDN CYIDYDELRK TAKENSPKII VAGASAYPRI
LDFKAFREIA DEVGAILMVD MAHIAGLVAA GVHPSPVPYA DVVTTTTHKT LRGPRGGMIL
CKQEYAKKID SAVFPGNQGG PLMHVIAAKA VSFKEALTDD FKIYQQNIVK NAKALASALM
EKGFKLVSDG TDNHLMLINL TNMNITGKEA QHKLDEVCIT CNKNGIPFDT QSPFITSGIR
LGTPAVTSRG MNEEDMKEIA DLIHLTISDF ENSRTNIIRR VEALCNKYPL YE