Gene Ccel_1621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1621 
Symbol 
ID7310374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1957363 
End bp1957863 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content29% 
IMG OID643608550 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002505953 
Protein GI220929044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA ACGGATATGT CCATAAATTC GATGACAATA TTGATACTGA TGTAATTATA 
CCAGCCAGAT ATTGTGTTAC CTTGAATAAA AAAGAGTTAG CAAGGCATTG TATGCATGAT
ATTAAAGAAG AGTTTTATAA AAATGTTAGG GACAGTGATA TCATTGTTGC AGGTGAAAAT
TTTGGTTGCG GGTCTTCAAG AGAAGTTGCC CCCATTGCTA TACAAGCGTG CGGTATAAAA
TGTATCATAG CTAAATCATT TGCTAGAATT TTCTTTCGTA ATGCAATAAA TATAGGCTTA
ATGCTAGTTA TAGATCATAA GCTCTATGAC TTGGTTTCAA CAGGAGATAA TATTGAAGTA
GATTTTGAGA ACAAATTTAT ACTTAACAAA AGTAACAATA TAAACGTTGA TTTTAATATG
AGTAATAGCA ATATTATCGA CGAAATTGTA AAGCATAAAG GATTAATCAA TTATATAAAA
GATAAAAAGT TCAATATATA G
 
Protein sequence
MKINGYVHKF DDNIDTDVII PARYCVTLNK KELARHCMHD IKEEFYKNVR DSDIIVAGEN 
FGCGSSREVA PIAIQACGIK CIIAKSFARI FFRNAINIGL MLVIDHKLYD LVSTGDNIEV
DFENKFILNK SNNINVDFNM SNSNIIDEIV KHKGLINYIK DKKFNI