Gene Ccel_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1616 
Symbol 
ID7312256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1953174 
End bp1954004 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content36% 
IMG OID643608545 
ProductNifH/frxC-family protein 
Protein accessionYP_002505948 
Protein GI220929039 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGTA TAAAACAAAT TGCTATTTAC GGTAAGGGTG GAATCGGAAA GTCAACTACA 
TGTTCAAATA TATCAGCTGC GTTAGGTTTA ATGGGCTATA AGGTACTGCA AATTGGATGT
GACCCAAAAG CTGACTCCAC AAAAAACTTA GTTGGCGGAA ATAAAATGCC AAATATCTTA
GATTATGTCA AGGAGAATTC AAAGAACATT TCCATCGATA ATATAGTTAC TAAAGGATTT
GCTAATACAT ACTGTATAGA AGCCGGAGGG CCGGAGCCTG GAATAGGATG TGCAGGCAGA
GGGATTATAT CGGCTATTGA AATTATCGAG CAGCTGAATT TAATTAAGGA ACTAGACATT
GAAGTAGTGG TTTACGATGT TTTAGGGGAT GTTGTTTGCG GCGGTTTTGC AGTTCCATTG
AGAATGGGAT TTGCAAAGGA TGTATATTTG GTTACTTCCG GAGAAGTAAT GGCATTATAT
GCAGCTAACA ATATATCAAA AGCCATTAAT CGATTTGCTC AGAGAAGTGA TGTTAGATTA
GGTGGAATTA TATGTAATCA GCGTAATGCT TATTTAGAAA AAGAAATTGT AAATATTCTT
TCTAGTAAAT TAGGCACACA TATTATAGGG TGGATTCCAA GGGATAATAT TGTTCAGGAA
TGCGAGCTGG CTGAAAAGAC TGTCGTGGAA GGTAGCCCTG AATCTAATCA AGCTCAAGTC
TACAAGGAAT TGGCTAAGAG TATTATTGAA AACAATAATT ACGTAATTCC AACTCCTTTA
TCAGACGAAG AGTTTGATAA GATGGTTAAG GAGCCACTAA TTAAAAGATA G
 
Protein sequence
MKSIKQIAIY GKGGIGKSTT CSNISAALGL MGYKVLQIGC DPKADSTKNL VGGNKMPNIL 
DYVKENSKNI SIDNIVTKGF ANTYCIEAGG PEPGIGCAGR GIISAIEIIE QLNLIKELDI
EVVVYDVLGD VVCGGFAVPL RMGFAKDVYL VTSGEVMALY AANNISKAIN RFAQRSDVRL
GGIICNQRNA YLEKEIVNIL SSKLGTHIIG WIPRDNIVQE CELAEKTVVE GSPESNQAQV
YKELAKSIIE NNNYVIPTPL SDEEFDKMVK EPLIKR