Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1550 |
Symbol | |
ID | 7310314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1899237 |
End bp | 1900685 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643608479 |
Product | glycoside hydrolase family 18 |
Protein accession | YP_002505882 |
Protein GI | 220928973 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0322184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGAT TAACGTCGAT TTTTTTAATA ATATCACTAA TGCTTAGTTG CACAGGTATT TCAAGTGCTG TAGCAAATGA TACGGTAAAT TCAATGGAAC AGACATACCG AAATGTAGCA TATTTTACTT CATGGGGAGG CTATCAGAGA GCCGTAGAGG TGGGGGATAT TAATCCTTCC TTGTTGACAC ATATTAACTT TGCATTTGCT AATTTATCGG CTGATGGAAC TATTACAGTT GGAGATCCGT GGATTGATAC CCAAAAACCA TATGGAGATG ATACTTGGGA AACAGAACTA AGGGGGCATT TCGGACAGCT GATTAGATTA AAACAACAAC ATCCTCATAT CAAGACGCTA ATATCGGTAG GAGGATGGAC CTGGTCAGAA AACTTTTCAG ATGTAGCGGC TTCTGATTCA TTAAGAAAGG CATGTGCTAA GTCTGCAGTT GATTTTGTAG TTAAATATGA TTTTGACGGT GTTGACCTTG ATTGGGAATT TCCGGTACAA GGCGGCAAGA ACATTCCTCA CCGTGTAAAT GACGGCGATA ACTATATTTT ATTGCTTAAA GAGATCAGAA CTGCACTGGA TCTACAGGAG AAAATTGATG GAAAGGATTA CCTACTAAGT ATTGCTGGTG CATCTTATAG CAAGTTCTTA GACGATTGCA AAATTGCAGA AATGATGCAC TATCTGGATT ATATAAACGT TATGACATAT AATTATCATG GTACATGGGA TGATATAACA AACCACAATA CTCCTTTGTA TACAAACTCA GATGATCTTT GTGTTTCCGC TTCCATTGAG AATTATATAT CTGCGGGAGT AGAACCTGCG GATATTAATT TGGGCCTGGC ATTTTCCGGC AAAGGGTGGA TTAACGTAAC TGATCCTAAC GGTTCAGGAC TTTATAAAAG CGGAACAGCA CCAACCTCAG CAGGGTATGG GAGCGGCACA TTTGAAGCTG CCGTATTTGA TTTTGGGGAT ATTACGGAAA ATTATATAAA TAAAAACAAC TATGTACGCT ATTGGGACGA TATTGCAAAA GTGCCTTACC TGTATAATGG AAGCACTTTT ATTACATATG AAGATGAAGA ATCAATAGGC TGCAAGGCGG ATTATATAAA GAAAATGGGT CTTGGGGGTG CTATGTTCTG GGAATTCTCT TATGATAAAA ACTTAGTACT TCAGAATGTA ATTGCCAAGA AGCTAAATAT TAATAAGATA CCGGAGGTAG TTTTTTACTA CGGAGACGTT AATGAGGACG GAATAATTGA TTCTATTGAT TTTGCACTGC TAAAATCATT CCTGTTAGGC AAGGGTGCTT TACAGAATAT GGATATCGCT GATGTTAACA ATGATGGTAA TATTGATGCT CTTGATCTTA CATGTTTAAA AATGATCTTA TTGGAAAAGA ATACTCCAAA ACCAATTGAG TTGAAATAG
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Protein sequence | MSRLTSIFLI ISLMLSCTGI SSAVANDTVN SMEQTYRNVA YFTSWGGYQR AVEVGDINPS LLTHINFAFA NLSADGTITV GDPWIDTQKP YGDDTWETEL RGHFGQLIRL KQQHPHIKTL ISVGGWTWSE NFSDVAASDS LRKACAKSAV DFVVKYDFDG VDLDWEFPVQ GGKNIPHRVN DGDNYILLLK EIRTALDLQE KIDGKDYLLS IAGASYSKFL DDCKIAEMMH YLDYINVMTY NYHGTWDDIT NHNTPLYTNS DDLCVSASIE NYISAGVEPA DINLGLAFSG KGWINVTDPN GSGLYKSGTA PTSAGYGSGT FEAAVFDFGD ITENYINKNN YVRYWDDIAK VPYLYNGSTF ITYEDEESIG CKADYIKKMG LGGAMFWEFS YDKNLVLQNV IAKKLNINKI PEVVFYYGDV NEDGIIDSID FALLKSFLLG KGALQNMDIA DVNNDGNIDA LDLTCLKMIL LEKNTPKPIE LK
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