Gene Ccel_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1529 
Symbol 
ID7310294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1864301 
End bp1865239 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content40% 
IMG OID643608457 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002505861 
Protein GI220928952 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.525395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAA TTTTTATGGG GACACCTGAA TTTGCAGTGC CTAGTCTCGA AATGCTTATA 
AATGAAGGTT ATAATGTTAT TGCAGTTGTA ACTCAGCCTG ACAAGCCAAA GGGTAGGGGA
AAAAAGCTGG CGGCTCCGCC TGTTAAGGAA TTTGCCTTGG AACACGGTAT TAAAGTTCTA
CAGCCTGCTA AAATAAAGAC ACCTGAATTT GTTGAACAAA TAAGGGAATT GGGCCCCGAT
TTGCTGATTA CCGCTGCATA CGGCAAGATT ATTTCGAAGG ATATGCTTGA TGTACCGCCC
TTAGGCTGTA TAAACGTACA TGGTTCTCTT TTGCCTGCGT ACAGGGGTGC GGCTCCTATT
CATTGGTCAA TAATAAATGG CGAGAAAGTA ACAGGCATTA CTACTATGTT TACTGACGTC
GGACTTGATA CTGGGGATAT GCTTTTAAAA AGGGAGCTTG AAATAAGTTC TGACATGACA
GCCGGAGAAT TACATGACGA AATGGCTATT TTAGGAGCAG AAGTACTAAA GGATACCCTT
ATTCATCTCA AAAATGGCAC ACTTGTAAGA AGCCCTCAGG ATGATGCACT ATCTTCGTAT
GCTCCTATTA TTACAAAGGA AGTCGGTCTT ATTGATTGGA ATAAAACAGT TCAACAGGTT
CACAACCTCG TAAGAGGAAC TAATCCTTGG CCTGGGGCTT TTACTTTTAT AAATGAAAGT
AAAATGAGGG TTTGGAAAAC CTGTATTGTA GACTTTGGTA ACAGCCAAGA GCATTGCCCG
GGAGAAATTG TTAGCGTTGA TGATAAAGGA ATACTTGTAA AGTGCTGTGA TGGTTACATA
ATGATAAAAG AGCTTCAATT TGATTCATCA AAACGGATGA AAGTCAGAGA TTATATAAGA
GGAAACAAAA TCGATACAGG TGAGAAACTT GGAAAATAA
 
Protein sequence
MKIIFMGTPE FAVPSLEMLI NEGYNVIAVV TQPDKPKGRG KKLAAPPVKE FALEHGIKVL 
QPAKIKTPEF VEQIRELGPD LLITAAYGKI ISKDMLDVPP LGCINVHGSL LPAYRGAAPI
HWSIINGEKV TGITTMFTDV GLDTGDMLLK RELEISSDMT AGELHDEMAI LGAEVLKDTL
IHLKNGTLVR SPQDDALSSY APIITKEVGL IDWNKTVQQV HNLVRGTNPW PGAFTFINES
KMRVWKTCIV DFGNSQEHCP GEIVSVDDKG ILVKCCDGYI MIKELQFDSS KRMKVRDYIR
GNKIDTGEKL GK