Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1528 |
Symbol | |
ID | 7310293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1863781 |
End bp | 1864260 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608456 |
Product | peptide deformylase |
Protein accession | YP_002505860 |
Protein GI | 220928951 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTACA GGCAAATAAG GAAAGATGGG GACGAAGTAT TAAGAAAGAT AAGCAGACCG GTTGATAGTA TCGATAAAAA AATATTAGCT CTTTTAGAGG ATATGGCAGA TACTATGTAC AGAGCTGACG GTGTTGGTTT GGCAGCTCCA CAGATTGGTA TTCTCAAGAG AATCGTTGTT ATAGACGTTG GGGATGGATT ATATGAGATG ATTAATCCGA TTATTCTGGA ACAAAGTGGA GAACAGGATG GTATGGAAGG TTGCCTGAGT ATCCCCGGGG TATTGGGAAA GGTTAAGCGC CCCATGAAAG TTACATTAAG ATATACGGAT AGAAATGGTG AGAGTATAAC TATCGAAGCC AAAGAATTCT TTGCAAGGGC CATATGCCAT GAACTAGACC ATTTGGACGG GATATTATAT AAAGATAAGG CACATAAAAT GTACACTGAA AAGGAACTTG AGGAAATGCA AAAAGATTAA
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Protein sequence | MAYRQIRKDG DEVLRKISRP VDSIDKKILA LLEDMADTMY RADGVGLAAP QIGILKRIVV IDVGDGLYEM INPIILEQSG EQDGMEGCLS IPGVLGKVKR PMKVTLRYTD RNGESITIEA KEFFARAICH ELDHLDGILY KDKAHKMYTE KELEEMQKD
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