| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1452 |
|---|
| Symbol | |
|---|
| ID | 7310223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1764192 |
|---|
| End bp | 1765436 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608378 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_002505786 |
|---|
| Protein GI | 220928877 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0556341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATG TTGCTATTTT AGGTTATGGA GTGGTTGGCT CCGGTGTTGC AGAAGTTATT
AAGAAAAATA GTGAAAGCAT AAGTCAGCGT GCAGGAACAG ATATAAAAGT AAAGTGGATA
TTGGATATTA GAGATTTTCC AGATAGTCCC GACAAGGATG TTCTTACCAA AAATGCGGAT
GATGTATTCA ATGACAATGA AGTCAGTATC ATAGTAGAAA CCATAGGTGG GGCAAAGATA
GCCCATGAAT TTACAAAAAG AGCTCTTATG GCAGGTAAAA GTGTTGTAAC TTCCAACAAG
GAGCTTGTTG CAACCCATGG GCCGGAGCTA TTACAACTGG CAAAAGAGAA TGGCGTCAGC
TATCTGTTTG AAGCCAGTGT CGGAGGAGGT ATTCCTATAA TACGTCCTTT GAATCAATGT
CTGGCTGCAA ATGAGATTAA CGGAATAACA GGCATACTCA ATGGAACAAC AAATTATATA
CTGACCCAAA TGAAAAGAGA AGGAAAAAGC TTTGAAGCTG CACTGAAGGA AGCACAGCAA
AACGGCTATG CAGAGCAGAA TCCTACAGCC GATGTTGAAG GCCACGATGC CTGCAGAAAA
ATTGCTATTC TGTCGTCCAT TGCTTATAAT GAATTCGTGG ATTGTGAAAA TATATACACA
GAGGGTATAA CAAAAATAAC TGTTGATGAT ATGAAATATG CAGATGCCAT AGGCGGAGTT
ATAAAATTGA TCGCGGTTAG CAAAAAAGCA AACGGTAAAA TATTTGCACG CGTTTCACCT
GCCATAGTTC TAAATGAACA TCCTCTTGCA AACGTTGAAG ATGTATTTAA TGCGATTGTT
GTTAATGGTG ATGCTGTGGG AGATGCCATG TTCTATGGCA GAGGGGCCGG AAAATTGCCT
ACTGCAAGTG CTGTTGTAGC TGATGTAATC GACATTGCTA AACATCCCGG TTCAGGAACG
GCCAGTGTGT GGGAAAGAAC CCAGCAAAAC AATATACTGC CTATAGAAGA TAGCACTACA
AAATTTCTGG TCAGGGTAAC AGCAAAAAAT AAAGAGGATG CAAAAAAGGA TATTTTATCA
ATTTTCGGAG AAATCCAATT AGTAGAACTA CATTCAAAAG TAAAGGATAA TGAGTTTGCA
TTTATAAGCT GTAAAAATAC AGAAAGCGAG TTTAAAACAA AGCTTGACAA GCTTGAATCC
GCATCAGACA TTACTGTATT AAACAGAATA AGGATTGAAG AATAA
|
|---|
| Protein sequence | MVNVAILGYG VVGSGVAEVI KKNSESISQR AGTDIKVKWI LDIRDFPDSP DKDVLTKNAD
DVFNDNEVSI IVETIGGAKI AHEFTKRALM AGKSVVTSNK ELVATHGPEL LQLAKENGVS
YLFEASVGGG IPIIRPLNQC LAANEINGIT GILNGTTNYI LTQMKREGKS FEAALKEAQQ
NGYAEQNPTA DVEGHDACRK IAILSSIAYN EFVDCENIYT EGITKITVDD MKYADAIGGV
IKLIAVSKKA NGKIFARVSP AIVLNEHPLA NVEDVFNAIV VNGDAVGDAM FYGRGAGKLP
TASAVVADVI DIAKHPGSGT ASVWERTQQN NILPIEDSTT KFLVRVTAKN KEDAKKDILS
IFGEIQLVEL HSKVKDNEFA FISCKNTESE FKTKLDKLES ASDITVLNRI RIEE
|
|---|
| |