Gene Ccel_1428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1428 
Symbol 
ID7312231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1732579 
End bp1733436 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content34% 
IMG OID643608351 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002505762 
Protein GI220928853 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGTAAGC CGGAAATATG TGCCGAAAAT TTTAATCCTA CATTGCTATA TGCATATATT 
AATATGGTTA ACTCTGAAAG CCATGTGACG CTACATACAC ACGACTATAC TGAAGTTAAA
ATTGTACTGT CCGGATATTT CAAATATATA ATAGACGATA AATTATATGA AGTTGCCAAA
GGGAATATTA TTATTATAAA TCCAGGTGTA CAACACGAAA AAATTATTCC TTCAGGAGTT
AAGGTCGAGG AATTTAATTA CGGGTTAACC AATATACATT TTAAGGAACT GCCCGAAAAT
TTTCTAATTG AACCCTCTTC TTTACCTGTT TTTACTTTAC CGCTTTATCA GCCCGAAATA
ATTAAATGTA TTAATGAAAC AATAAATGAA CAGGAAAAAA ATGAGCCTTA CTGCGATTTA
TTTATAAAAA GCAGCATAAT GAAACTAACA GCATTGTTAC ACAGGGGAAT GACAGCAAAC
AAAGAAAGAA CGGAAAAAAC ACGGCTGGAT ATACAAACTT CCGAAAAAAC AAATATAGTT
AATGATATTC TTGAATATTT GAGTACAAAT TATATGGAAC AGATTTCTCT GTACAGAATA
GCTCACAATA TGTATCTGAG TCCGGTTTAT ATTTCCAAAA TATTCAAGGA AGAGACGGGT
GAATCCCCTA TAAACCATTT AATAAGGATT CGCCTTACAA AAGCACGTGA ACTGCTAATG
TCAGGAAATA TGCCTATTAA AACCGTTGCA AGAAGTGTAG GTTATGAGGA TGCCTTCTAC
TTCAGCAAGC TTTATAAGAA ATACTATGGG ATTCCCCCTT CAATGGAAAA GAGGAGCAAT
GCGGCTGACA TTATCTAA
 
Protein sequence
MCKPEICAEN FNPTLLYAYI NMVNSESHVT LHTHDYTEVK IVLSGYFKYI IDDKLYEVAK 
GNIIIINPGV QHEKIIPSGV KVEEFNYGLT NIHFKELPEN FLIEPSSLPV FTLPLYQPEI
IKCINETINE QEKNEPYCDL FIKSSIMKLT ALLHRGMTAN KERTEKTRLD IQTSEKTNIV
NDILEYLSTN YMEQISLYRI AHNMYLSPVY ISKIFKEETG ESPINHLIRI RLTKARELLM
SGNMPIKTVA RSVGYEDAFY FSKLYKKYYG IPPSMEKRSN AADII