Gene Ccel_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1422 
Symbol 
ID7310195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1725971 
End bp1727113 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content40% 
IMG OID643608345 
Productantifreeze protein type I 
Protein accessionYP_002505756 
Protein GI220928847 
COG category[S] Function unknown 
COG ID[COG4260] Putative virion core protein (lumpy skin disease virus) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000908781 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA TTGATAGAGT TAAATTTGAC GGACTTAGAT CTCGTGACTG GATCGTTTAT 
AAGCATCCTG TCGAAGATCT TGTTTATGGC ACGCAGCTTA TTGTGGGCGA AGGTCAGATC
GCTGTTTTTG TTAAGGGCGG AGAGGTTTGT GACCTATTTA CTCCGGGTAC CTATACTCTT
GATGCAAAAA ATCTTCCAAT ACTTAGAGTT TTTGTAAATC TGCCTTTTGG AGGAAAAACT
CCTTTCAGTG CAGAAATATA CTACATCAAT ACTACTACAA AGCTTGATAT CAACTGGGGA
ACATCTGATC CAGTACAAAT AATTGATCCC AAATATTATA CCAGACTCAG GATTCGTGCG
TTTGGTCAGA TGGGTCTGAA ACTGGATAAC TACGAAACTT TTTTCCGTGA ATTGATCGGT
GTAATGAATC CGGCCGACAT TATTAAGTTT AACAATGTTA TAGACTTCTT CAAGGGAATG
TTGATTCAGA AAATCAAGAG CATAATTGCC AATGTAATTG TAAATCAAAA AATTTCTGCA
TTGGAGATTA CTGCCAGACT CGACGATATT GCAAATTATA CCTTTGATTT GATTGCTCCA
GAATTTGCTA AATATGGTTT ATCTGCAATC AGCTTAATAA TAAAATCTAT TAACTTTCCT
GATGAAGATT TTGAGGAAAT TAACAAGATT CTCAAAAACA AGGCTGAATT TGAGATTATG
GGTGATAACC GATATGTAAC AAAGCGTTCT TTTGATGTTT ATGACCATGC CGCCAGCAAT
AATTCCGGTG TGGCAGGTGC ATTTGCTGCA GGAGGTGTAG GTTTGGGTGT AGGTTTGGGT
GTCGGTGCAT CTCTGGGTTC CGACATACAT AATACCATAA ACACAAGGGC GGCTGCAGAT
AAGGCGACTA TAGCATGTCC CTCCTGCAAG GCTCAAAATC CAGCAAAATC AAAGTTTTGC
TGCGAATGCG GAAAATTATT GGAAACTCCC AAGAAGGTTT GTGCTTCTTG CGGAGTATTA
ATACCAGGTG ATCCAAAATT CTGTCCTGAG TGCGGAACTT CTATGGGAAC TCAGACCTGT
GAATGCGGAG CAGAAGTGCC GGTTAGCACA AAGTTTTGCC CACAATGCGG TAAAAAGCTA
TAA
 
Protein sequence
MAIIDRVKFD GLRSRDWIVY KHPVEDLVYG TQLIVGEGQI AVFVKGGEVC DLFTPGTYTL 
DAKNLPILRV FVNLPFGGKT PFSAEIYYIN TTTKLDINWG TSDPVQIIDP KYYTRLRIRA
FGQMGLKLDN YETFFRELIG VMNPADIIKF NNVIDFFKGM LIQKIKSIIA NVIVNQKISA
LEITARLDDI ANYTFDLIAP EFAKYGLSAI SLIIKSINFP DEDFEEINKI LKNKAEFEIM
GDNRYVTKRS FDVYDHAASN NSGVAGAFAA GGVGLGVGLG VGASLGSDIH NTINTRAAAD
KATIACPSCK AQNPAKSKFC CECGKLLETP KKVCASCGVL IPGDPKFCPE CGTSMGTQTC
ECGAEVPVST KFCPQCGKKL