Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1422 |
Symbol | |
ID | 7310195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1725971 |
End bp | 1727113 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643608345 |
Product | antifreeze protein type I |
Protein accession | YP_002505756 |
Protein GI | 220928847 |
COG category | [S] Function unknown |
COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000908781 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATCA TTGATAGAGT TAAATTTGAC GGACTTAGAT CTCGTGACTG GATCGTTTAT AAGCATCCTG TCGAAGATCT TGTTTATGGC ACGCAGCTTA TTGTGGGCGA AGGTCAGATC GCTGTTTTTG TTAAGGGCGG AGAGGTTTGT GACCTATTTA CTCCGGGTAC CTATACTCTT GATGCAAAAA ATCTTCCAAT ACTTAGAGTT TTTGTAAATC TGCCTTTTGG AGGAAAAACT CCTTTCAGTG CAGAAATATA CTACATCAAT ACTACTACAA AGCTTGATAT CAACTGGGGA ACATCTGATC CAGTACAAAT AATTGATCCC AAATATTATA CCAGACTCAG GATTCGTGCG TTTGGTCAGA TGGGTCTGAA ACTGGATAAC TACGAAACTT TTTTCCGTGA ATTGATCGGT GTAATGAATC CGGCCGACAT TATTAAGTTT AACAATGTTA TAGACTTCTT CAAGGGAATG TTGATTCAGA AAATCAAGAG CATAATTGCC AATGTAATTG TAAATCAAAA AATTTCTGCA TTGGAGATTA CTGCCAGACT CGACGATATT GCAAATTATA CCTTTGATTT GATTGCTCCA GAATTTGCTA AATATGGTTT ATCTGCAATC AGCTTAATAA TAAAATCTAT TAACTTTCCT GATGAAGATT TTGAGGAAAT TAACAAGATT CTCAAAAACA AGGCTGAATT TGAGATTATG GGTGATAACC GATATGTAAC AAAGCGTTCT TTTGATGTTT ATGACCATGC CGCCAGCAAT AATTCCGGTG TGGCAGGTGC ATTTGCTGCA GGAGGTGTAG GTTTGGGTGT AGGTTTGGGT GTCGGTGCAT CTCTGGGTTC CGACATACAT AATACCATAA ACACAAGGGC GGCTGCAGAT AAGGCGACTA TAGCATGTCC CTCCTGCAAG GCTCAAAATC CAGCAAAATC AAAGTTTTGC TGCGAATGCG GAAAATTATT GGAAACTCCC AAGAAGGTTT GTGCTTCTTG CGGAGTATTA ATACCAGGTG ATCCAAAATT CTGTCCTGAG TGCGGAACTT CTATGGGAAC TCAGACCTGT GAATGCGGAG CAGAAGTGCC GGTTAGCACA AAGTTTTGCC CACAATGCGG TAAAAAGCTA TAA
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Protein sequence | MAIIDRVKFD GLRSRDWIVY KHPVEDLVYG TQLIVGEGQI AVFVKGGEVC DLFTPGTYTL DAKNLPILRV FVNLPFGGKT PFSAEIYYIN TTTKLDINWG TSDPVQIIDP KYYTRLRIRA FGQMGLKLDN YETFFRELIG VMNPADIIKF NNVIDFFKGM LIQKIKSIIA NVIVNQKISA LEITARLDDI ANYTFDLIAP EFAKYGLSAI SLIIKSINFP DEDFEEINKI LKNKAEFEIM GDNRYVTKRS FDVYDHAASN NSGVAGAFAA GGVGLGVGLG VGASLGSDIH NTINTRAAAD KATIACPSCK AQNPAKSKFC CECGKLLETP KKVCASCGVL IPGDPKFCPE CGTSMGTQTC ECGAEVPVST KFCPQCGKKL
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