Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1414 |
Symbol | |
ID | 7312229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1717936 |
End bp | 1718286 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643608336 |
Product | LrgA family protein |
Protein accession | YP_002505748 |
Protein GI | 220928839 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.375061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAC TAAGGCAGTT TTTAATCATA CTAATCATTT GCTTTATTGG AGAAGTATTG AACAAAGTAG TGCATGTTCC GCTCCCGGGC AGTATCATAG GAATGATATT GCTTTTTATT TGCCTGATAA CGGGAGTCAT TAAATTGGAG AAAGTAGATG AGATAAGTAG ATTTTTAATA GATCATCTTG CATTCTTTTT TATTCCGGCA GGGGTTGCCC TACTTGGTTA CGTGGGTGTT TTAAAGGAAA GTATCCTTCC TATATTGGTT ATATGTTTTG TTACAACTCT TGTAGTTATG ATTGTAACCG GTTGGACTAT ACAGCTGATT AAAGGGAGGA AGAGCAGATG A
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Protein sequence | MKLLRQFLII LIICFIGEVL NKVVHVPLPG SIIGMILLFI CLITGVIKLE KVDEISRFLI DHLAFFFIPA GVALLGYVGV LKESILPILV ICFVTTLVVM IVTGWTIQLI KGRKSR
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