Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1406 |
Symbol | |
ID | 7310181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1708909 |
End bp | 1710069 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608328 |
Product | basic membrane lipoprotein |
Protein accession | YP_002505740 |
Protein GI | 220928831 |
COG category | [R] General function prediction only |
COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000211605 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAT TAACGGCTTT AATGCTAACA ATTGTATTTT TTTGTATGGC AGTATTATCC GGCTGTGGGT TAAGTGCTAC TGACAACAGT GGAAATTCAT CAGCATCTAC CTCTACATCA GCAGGCTCAA CAGCATCAGA TTCATCAGAT GCAAACGGAT TAAAAGTAGG ATTTATCTAT ATCGGATCAG TTGGAGATGT AGGATATACC TATGCACATG ATCAAGGTCG TAAATACCTT GAAACTACTC TTAAAGACAA GAATATAAAG ACATTGGCGG TTGAGAATGT TCCTGAAACG GCAGAATCCG AAAAGGCAAT AAATAACCTC ATTGACCAAG GTTGTAAAGT TATATTCGCA ACAAGTTACG GTTACATGGA ATTTGTTGAA AAAGCAGCAA AAGAAAATCC GGACGTTAAG TTCTTTCACT GCTCCGGATA TAAATCAAAT AGTACTAATT TTGTAAACTA TTTCGGGCAG ATTGAAGAAG GAAGGTATCT TTCAGGTATT GTTGCAGGAC TAAAGACAAA AACAAACAAC ATCGGATATG TTGCAGCAAT GCAGATTCCT GAGGTTATCA GAGGAATAGA CTTCTTTACA CTTGGTGTTC GCTCTGTAAA TCCTGATGCA GTGGTAAATG TGAAATGGAC AAATACCTGG TACGATCCTC AGGTTGAAAA GGATGCGGCT ACAGCACTTC TTAATGAAGG AAACGATGTT ATTGCTCAGC ATCAGGATTC AACAGCTGCA CAAATTGCAG CTCAGGAAAA GAGTGCATTT GCAATCGGAT ACAATTCAGA CAGTAGCAAG GCAGCTCCAA AGGCATACCT GACAGCTCCG GTGTGGAACT GGGGAGTATA CTATGCTGAT CAGGTTCAGA AGATACTGGA CGGAACATGG AAAGCTGAAA ATTACCTTGG CGGAATGAAG GATGGAGTTG TTGATATCGG GCCAATATCA GACTTAGTTG AAGATGACAT AAAAGCTAAG GTTGAAGAAG CAAAGAAAAA GATTCTCGAT GGTTCATTAA ATGTGCTTGC AGGTCCTATC AAGGATCAGA CAGGTGCAGT AAAGATTCCT GAAGGAAAAG TTATGACTGT TGAAGAACAG CAGTCCTGTA AATGGTTTGT TGAAGGTGTT AACGGTAAAA TAAATAAATA A
|
Protein sequence | MKRLTALMLT IVFFCMAVLS GCGLSATDNS GNSSASTSTS AGSTASDSSD ANGLKVGFIY IGSVGDVGYT YAHDQGRKYL ETTLKDKNIK TLAVENVPET AESEKAINNL IDQGCKVIFA TSYGYMEFVE KAAKENPDVK FFHCSGYKSN STNFVNYFGQ IEEGRYLSGI VAGLKTKTNN IGYVAAMQIP EVIRGIDFFT LGVRSVNPDA VVNVKWTNTW YDPQVEKDAA TALLNEGNDV IAQHQDSTAA QIAAQEKSAF AIGYNSDSSK AAPKAYLTAP VWNWGVYYAD QVQKILDGTW KAENYLGGMK DGVVDIGPIS DLVEDDIKAK VEEAKKKILD GSLNVLAGPI KDQTGAVKIP EGKVMTVEEQ QSCKWFVEGV NGKINK
|
| |