Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1401 |
Symbol | |
ID | 7310177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1703497 |
End bp | 1704978 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643608323 |
Product | integral membrane protein |
Protein accession | YP_002505735 |
Protein GI | 220928826 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0128136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCAAA AAATCACAGA AAAAACACTA ATTGTATTTT GTTTAGTGTA TTTGATAATC ATATCCGTTT GGAACTTTGT TTATTTAATA CAAAATAAAG CTGCAGTCTA TATTTTTCCT CTAGAGCTTT TTTGTATAGT TGTGTTTTTG GTTATATACA GATTAAAGGC AGGCAAAAGG ATATTTGCAA TATTATTGTT TGTTATGGCT TTCTGCCTAA AAAGCTATGT TGCGGTTCGT TATAATGCAG CTCCACAATC GGATTTCAAA TTAATTTATA ATGCAGCAAT AAAATTAGCT CAAGGTGATT TTTCATTTTC AAATACAAAA TATTTCAGCT TGTGGTCATA TCAGACTGGG ATTGTATTAT ACTATGGACT TCTTCTGAAA CTTGGCCTAA ATGTTATTGG TCTTAAAATT TGCAACTGTT TTTTTATAGC AGGTGTTAAT GTTCTGGTAT ACAAGATTTC AGAAAGGCTT GTTGGCGATA GGTGTGCAAG ATTTATTTCG GTAATGTACC TTTTTTATCC TGCAACATTT TTCTTATGTT CTGTATTAAC AAATCAACAT GTTTCCAATT TCTTAATATT ACTGGGGGTT TACCTGTATA TTTTCAGAAA AACCAACACA GTAGCTAATA CTGTATTAGC GGCTGTAATG ATTGCTATTG GAAATGCCTT GCGTCCTCAA GGTATTTTAG TCGTTGCTGC ATTTATTATT TGGGCAGTGA TAGAATTATT ACACAAAAAT ACCGATAAAA AAATTAAGGT AGAAACAGCG GTAAAGATTT TAGGTTTTGT GACTGTTTAC GTACTTTTGG GAAAAGGTAT GTCCATGGCA ACACAGATTT CAGGGTTGAA TCAGAATGGG CTAAGCAACA ACTTTCCATT ATATAAAATA GTGGTAGGAT TAAACAGCGA GACTGCCGGA TGCTATTCTT ATGAGGATGC CTCAAAACTT ATTACCATAA AAGATAGTAA ACTCAGAAAT CAAAGGGCTT TAGGGCTTAT CAAGGAAAGG CTTACGTACA GTGATAAAAT GAAAAAACTA ATGCATGGAA AACATGAAAA GATGTGGGTA AAAATGGATA CTACAATCGA TTGGGGCTTC AAATATTTAA ATCAGATTGG GATAACATTT TTTAGAAAGA ATATTGTATA TGAAAACTTT AAAATAAGAA TTTTAAAGTT GGAAAAGGTT TTTTATTGTT TTATATTTGT TTTGGCGACA GTAGGTGTTT TTGCAGAAAT AAGAAAGCAC AAATATAAAA AAGGTTTTGT TCCCATTTCA TTAATCATAG CTGTGAATTT CGCAGTATAT TGCATGATAG AAATTCAAAG CAGGTACCGG GACTTTCAAA TGATTTTCAT ATTCATACTT GCGGCAGTCG GTATTAAATA TTTAGCAATG CTTGTAAAAA ACAATTTAAT CTTATGGCAT AATAGAATAT ACTTGACATC AGTGGATAAA ACTATAAAAT AA
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Protein sequence | MFQKITEKTL IVFCLVYLII ISVWNFVYLI QNKAAVYIFP LELFCIVVFL VIYRLKAGKR IFAILLFVMA FCLKSYVAVR YNAAPQSDFK LIYNAAIKLA QGDFSFSNTK YFSLWSYQTG IVLYYGLLLK LGLNVIGLKI CNCFFIAGVN VLVYKISERL VGDRCARFIS VMYLFYPATF FLCSVLTNQH VSNFLILLGV YLYIFRKTNT VANTVLAAVM IAIGNALRPQ GILVVAAFII WAVIELLHKN TDKKIKVETA VKILGFVTVY VLLGKGMSMA TQISGLNQNG LSNNFPLYKI VVGLNSETAG CYSYEDASKL ITIKDSKLRN QRALGLIKER LTYSDKMKKL MHGKHEKMWV KMDTTIDWGF KYLNQIGITF FRKNIVYENF KIRILKLEKV FYCFIFVLAT VGVFAEIRKH KYKKGFVPIS LIIAVNFAVY CMIEIQSRYR DFQMIFIFIL AAVGIKYLAM LVKNNLILWH NRIYLTSVDK TIK
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