Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1400 |
Symbol | |
ID | 7310176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 1702217 |
End bp | 1703263 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643608322 |
Product | Integrase catalytic region |
Protein accession | YP_002505734 |
Protein GI | 220928825 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000187237 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCAC AAGATCGTAT AGTTAAAAAC AAAATGAGCC TGATTGAGTT GGCCGAATAT CTTCAAAACG TAAGTGAAGC ATGTAAAATT CATGGAGTCA GCAGACAGCA CTTCTATGAT ATTAAGAAAG CTTACGAGGA AAATGGTCTG GAAGGATTAA AGGACAAGAC CAGAAGAAAG CCTTGTATGA AAAACAGGGT TGCTCCAGAA ACTGAGGAAG CCGTATTAAG AATAGCATAT GAAAAGCCGG CATACGGGCA GCTCAGGGCA AGTAACGAAC TGAGAAAACA AGGAGTTCTT GTATCAGCCG GAGGGGTAAG ATCAATCTGG CAGAGATATA ATATAGAAAC CTTTGACAAG AGACTCAAAA AGCTTGAAGA AAAGGCTGCC AAGGAAGGCA TACTTTACAC TGAAGATCAG CTCGCTGCTC TGGAAAAGGC ACAGCAGGAA AAGAATATAT CCATAGACGA GATAGATACC CAGCACCCGG GATATTTGCT GGCACAGGAC ACTTTCTATG TGGGCTATAT CAAAGGTGTT GGACGTATAT ATCAGCAAAC TGCCATAGAT ACTTATTCGG CAGTGGGATT CGCAAAATTA TATACAGCCA AGGTACCAGT AACAGCAGCA GATATATTAA ATGACAGAGT CTTACCGTTC TTTGAGAATC ATATGATACC GATAATGAGA GTACTCACAG ACAGAGGAAC GGAGTACTGT GGAGCACCTG AGAAACACTT GTATGAGTTA TTTCTGCAGA TGAACGACAT TGAGCACACA ATGACAAAGG CTAAAAGCCC TCAAACAAAC GGTATATGCG AGCGTTTTAA CCAAACAATT CTGAATGAAT TTTATAAACC CGCATTCCGA AGGACAATGT ATAAATCAGT TGAACAAATG CAGGAGGATT TGGATTTTTA TATGCTGGAA TACAACGAAG AGCGAACACA TCAGGGGAAA AGGTGTAAAG GCAAGACGCC GATGCAGACA TTTCTTGACA GCTTGCCTCT TGCCCGAGAG AAGCTCCTGA ATGATCCTGC GAGTTAA
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Protein sequence | MTAQDRIVKN KMSLIELAEY LQNVSEACKI HGVSRQHFYD IKKAYEENGL EGLKDKTRRK PCMKNRVAPE TEEAVLRIAY EKPAYGQLRA SNELRKQGVL VSAGGVRSIW QRYNIETFDK RLKKLEEKAA KEGILYTEDQ LAALEKAQQE KNISIDEIDT QHPGYLLAQD TFYVGYIKGV GRIYQQTAID TYSAVGFAKL YTAKVPVTAA DILNDRVLPF FENHMIPIMR VLTDRGTEYC GAPEKHLYEL FLQMNDIEHT MTKAKSPQTN GICERFNQTI LNEFYKPAFR RTMYKSVEQM QEDLDFYMLE YNEERTHQGK RCKGKTPMQT FLDSLPLARE KLLNDPAS
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