Gene Ccel_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1390 
Symbol 
ID7310167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1691566 
End bp1692177 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID643608312 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_002505724 
Protein GI220928815 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR03334] indolepyruvate ferredoxin oxidoreductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000144436 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC AAGGTTTTGA TATATTAATA TCGGGAGTCG GAGGGCAGGG AACAGTTCTT 
GCATCCAGGC TTATAGCTGC GGCGGCTATT AATCAGGGCT GTTTTGCAAG AACTGCCGAG
ACTATCGGTA TGTCCCAAAG AGGCGGGTGT GTCGTCAGCC ATGTACGTAT AGACAGCGAA
AAATCTGGCT CTATAATTCC ATTGGGCGGT GCAGATATGA TTATAGCCTT CGAGCTTGCG
GAAGCTGCAC GGAGTATTCC GAGACTTTCA AGAAAAGGCT GCTGTATTGT TAATACACAG
GTTATAAAGC CTGTATCAGC ATCTCTTGGT AGCACTAATT ATGATATTGA TGAAATAAAT
CAATATATAA AAGACAATTC TGCGGAAGTA TATTTTGTAG ACGGATATTC CCTGGCTGAA
AAAGCTGGTA ATGTAAAAGC AGTAAACGTA GTCTTGCTTG GAGCTGCTAC AGCTGTGTCT
AAAATGCCGT TTACAAAAGA AATAATGCTT AATACTATTA TAGAAAATGT TCCCCAGAAA
TTCAGAGAGC TAAATCAGAA AGCATTTGAA ATGGGATATG AAGCAGCAAA ACAATTAATA
AAAAAAGTCT AA
 
Protein sequence
MSKQGFDILI SGVGGQGTVL ASRLIAAAAI NQGCFARTAE TIGMSQRGGC VVSHVRIDSE 
KSGSIIPLGG ADMIIAFELA EAARSIPRLS RKGCCIVNTQ VIKPVSASLG STNYDIDEIN
QYIKDNSAEV YFVDGYSLAE KAGNVKAVNV VLLGAATAVS KMPFTKEIML NTIIENVPQK
FRELNQKAFE MGYEAAKQLI KKV