Gene Ccel_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1386 
Symbol 
ID7310164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1686412 
End bp1688301 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content35% 
IMG OID643608308 
ProductABC transporter related 
Protein accessionYP_002505720 
Protein GI220928811 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000285289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAG GTAGTCCAAA AGGAAGAGGT ATTGAGAATC CAATAAAAGT TTTAACAAGA 
TTACTATCCT ATATTTTAAA GGAATATAAA ATTTTATTTG CCATTGTTGT AATATGTATA
ATTATCAGCT CACTTTCTAA TGTTGCAGGT ACATTATTTT TAAGAAATCT TATTGATGAT
TATATAACCC CGCTGTTAAA TGAAACCGTG GCTGATTTCG GGCCGCTGTT AAAAGCTATA
TTAACAATCG CCTCAATTTA CCTTGTAGGA GTTTTGACTA ATTACGTATT TAATCGAATT
ATGATTGTAA TATCTCAAGG CTCTTTAAAA AAAATAAGAG ATGATATGTT TGCACATATG
GAAACTTTGC CTATAAGTTA TTTTGATACT CATTCTCATG GAGAACTTAT GAGTTTATAT
ACAAACGATA CTGATTCTTT AAGGCAGATG ATAAGCCAAA GTATACCTCA GATGTTGTCT
TCGGTTATAA CTATTGTAAG TGTGTTCTTT TCTATGATTT TTTTAAGTAT ACCCCTGACG
ATTGTACAAA TGTTATCAAT GGCTGTCATG CTATTGATAA TTAAGGTTAT TGGCGGAAAG
AGCGGTATGT ATTTTGGACT TCAGCAAAGG GATATTGGTA AGATAAATGG TTTTATTGAA
GAAATGATGG AAGGACAAAA GGTTGTAAAG GTATTTTGCC ATGAGGATGA AGCAAAAATA
AAATTTGATA AATTAAATGA TAGCCTGTTT GATAGTGCAA ATAATGCTAA TAAATTTGCA
AACATTTTAA TGCCTATACT AGGAAACATC GGATACATTA CTTATGTTTT AATTTCCATT
ATTGGTGCAA TACTTGCTAT TTCAGGCTTT GGAGGTTTTA CAGTCGGAGC ATTGGCAGCT
TTTCTTCAAT TAACCAGAGG CTTTAGCCAA ACTACGGGGC AGGCTTCACA GCAGTTTAAT
TTTATTGTTA TGGCTTTAGC CGGAGCAGAG CGTATATTTA AGCTGCTTGA CGAAAAGCCG
GAGACGGATG AAGGGTATGT GTCTTTAGTT AATGTAAAAG AAAATGAAAA GGGAGAACTG
TCAGAATCTG TAGAACGTAC TGGAATATGG GCATGGAAGC ACCCGCATAA GGATGGTACT
GTTACTTATA CCGAGCTCCT CGGTGAAGTA GTATTTGATG ATGTAGATTT TGGGTATAGA
GAAGATAAGA TTATATTACA CAATATAAGT CTTTATGCAA AACCTGGACA AAAGGTAGCT
TTTGTAGGTG CTACCGGTGC CGGAAAAACA ACAATTACAA ATTTAATAAA CAGGTTCTAC
GATATTCAGG ATGGAAAAAT AAGATATGAC AGTATTAATA TCAACAAAAT CAAAAAGAAC
GATTTAAGAA GTTCATTGGG AATAGTACTT CAGGAGGCTC ACCTTTTTAC AGGAACAGTT
GCAGACAACA TAAGATATGG TAAATTAAAT GCAACGAACG AAGAGGTTAT TGCTGCAGCA
AAACTAGCAA ATGCTCACCA ATTTATAAAA CATTTACCTG ATGGATATGA AACAATCATA
ACAGGAGATG GAGGAAATCT GTCTCAAGGA CAAAGACAGC TGCTGACAAT TGCAAGAGCT
GCTATTGCAG ATCCGCCAGT TTTGATTCTG GATGAAGCAA CTTCAAGTAT AGATACAAGG
ACGGAGGCTA TTGTTCAAGA GGGAATGGAC AGGCTTATGA AGGGGAGAAC CGTATTTGTA
ATTGCACATA GGCTTTCCAC TGTTAAAAAT TCTGATGTGA TTATGGTACT AGAACAGGGG
CAGATTATTG AAAGGGGAAG CCACAACGAT TTAATTGAGC AAAGAGGAAA GTATTACCAA
TTGTATACAG GAGCGTTTGA ATTGTCATAA
 
Protein sequence
MGKGSPKGRG IENPIKVLTR LLSYILKEYK ILFAIVVICI IISSLSNVAG TLFLRNLIDD 
YITPLLNETV ADFGPLLKAI LTIASIYLVG VLTNYVFNRI MIVISQGSLK KIRDDMFAHM
ETLPISYFDT HSHGELMSLY TNDTDSLRQM ISQSIPQMLS SVITIVSVFF SMIFLSIPLT
IVQMLSMAVM LLIIKVIGGK SGMYFGLQQR DIGKINGFIE EMMEGQKVVK VFCHEDEAKI
KFDKLNDSLF DSANNANKFA NILMPILGNI GYITYVLISI IGAILAISGF GGFTVGALAA
FLQLTRGFSQ TTGQASQQFN FIVMALAGAE RIFKLLDEKP ETDEGYVSLV NVKENEKGEL
SESVERTGIW AWKHPHKDGT VTYTELLGEV VFDDVDFGYR EDKIILHNIS LYAKPGQKVA
FVGATGAGKT TITNLINRFY DIQDGKIRYD SININKIKKN DLRSSLGIVL QEAHLFTGTV
ADNIRYGKLN ATNEEVIAAA KLANAHQFIK HLPDGYETII TGDGGNLSQG QRQLLTIARA
AIADPPVLIL DEATSSIDTR TEAIVQEGMD RLMKGRTVFV IAHRLSTVKN SDVIMVLEQG
QIIERGSHND LIEQRGKYYQ LYTGAFELS