Gene Ccel_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1352 
Symbol 
ID7310132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1650991 
End bp1651713 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content39% 
IMG OID643608272 
Productribonuclease PH 
Protein accessionYP_002505686 
Protein GI220928777 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000399193 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGGC ATGACGGAAG AAGTAACACG CAATTAAGGT CAGTAAGGAT ACTGAGAAAT 
TATATCAAAC ATGCGGAAGG GTCAGTTCTC ATAGAAGTTG GAGATACAAA AGTTATTTGC
ACCGCTTCTG TTGAAGAGAG AATCCCTCCT TTTAAAAAGG ATTCAGGAGA AGGTTGGGTA
ACTGCTGAAT ATTCTATGCT TCCGAGAGCT ACAGCTGTAA GGAATCAAAG AGATATTTCT
AAACTAAAGC TTAATGGAAG AAGTTCTGAA ATTCAAAGAC TAATAGGAAG GTCACTTAGA
ACTATAGTTG ACTTGAAACT TTTAGGTGAG AGAACCATAA CCATTGACTG TGATGTAATA
CAGGCCGATG GAGGAACCAG AACCGCTTCC ATCACTGGAA GTTATGTAGC ATTGGTGGAT
GCATGCAGGA CACTGGTTAA AAAAGGGCTA ATTTCAAAAA TGCCGGTTAC AGGAACTGTT
GCAGCAACAA GCGTGGGAAT TGTAAATGGT GAGGAGCTTT TAGACCTCTG TTATATTGAA
GACAGTAATG CAGAGGTTGA TATGAACGTT ATAAAGACAG ATAAAGGCGA ATTCATTGAA
ATACAGGCTA CCGGTGAAAA ATCAAGCTTT AGTAAAAAAC AGCTGGATCA ACTACTGAAT
TTGGCTGAAT CAGGAATACA TGAGCTTATA AAAGCTCAGA ATGAGGTCTT ATGGAAAGAT
TAA
 
Protein sequence
MLRHDGRSNT QLRSVRILRN YIKHAEGSVL IEVGDTKVIC TASVEERIPP FKKDSGEGWV 
TAEYSMLPRA TAVRNQRDIS KLKLNGRSSE IQRLIGRSLR TIVDLKLLGE RTITIDCDVI
QADGGTRTAS ITGSYVALVD ACRTLVKKGL ISKMPVTGTV AATSVGIVNG EELLDLCYIE
DSNAEVDMNV IKTDKGEFIE IQATGEKSSF SKKQLDQLLN LAESGIHELI KAQNEVLWKD