| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1349 |
|---|
| Symbol | |
|---|
| ID | 7312219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1647322 |
|---|
| End bp | 1647837 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643608269 |
|---|
| Product | protein of unknown function DUF208 |
|---|
| Protein accession | YP_002505683 |
|---|
| Protein GI | 220928774 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1636] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000516644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAC TATTGCATAT GTGCTGCGGG CCTTGCTCCA CGTACCCTGT ACAGGAACTT
CTGGAGGAGG GCGTTGACAT ACAGGGGTAT TTTTACAACC CCAATATACA TCCTATAGAG
GAACACAAAA GACGTAGGGA AAATGTCGAA AAGTTCAGTA AAATCAAAAA CATTCCTGTT
ATTTATGATG ATGATTTCAG ACAGACTGAA TGGGAAGGCA TGAAGGGTAT GGGAGGTTCA
CGGTGCCTCC ACTGCTATAG CGTTAGACTT GAAAGTGCAG CAAAGCTTGC TGTTCAGAAG
GGGTGTGACG CATTTACCAC AACACTCCTT GTTAGCCCGT ATCAGAAACA TGATTTAATA
AAAGAACTTG GAGAAAAATA CGCTGCACAA TACGGAACTA CATTTCTGTA CAGGGATTTC
AGACCCGGCT TCAGACAGGG GCAGCAGATG GCAAAAGATA TGGAGCTGTA CCGTCAAAAA
TATTGCGGAT GTATATTATC ACTTCCTGTA AAATAA
|
|---|
| Protein sequence | MRVLLHMCCG PCSTYPVQEL LEEGVDIQGY FYNPNIHPIE EHKRRRENVE KFSKIKNIPV
IYDDDFRQTE WEGMKGMGGS RCLHCYSVRL ESAAKLAVQK GCDAFTTTLL VSPYQKHDLI
KELGEKYAAQ YGTTFLYRDF RPGFRQGQQM AKDMELYRQK YCGCILSLPV K
|
|---|
| |