Gene Ccel_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1315 
Symbol 
ID7312215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1618149 
End bp1618859 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content37% 
IMG OID643608234 
Producttype IV pilus assembly PilZ 
Protein accessionYP_002505649 
Protein GI220928740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00287797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTA ATGATATTAT TATTGGGACA AAATTGGAAA TTGAAATACC GGAGTACATA 
AAAAGCTTCC CCTCTCAATC TTCCAGTTAT ATCAGCCAAT TAGTTGATGT TATTGACGAA
AATACCATTA CTATTGCTGC ACCCATAAGT GAAGGCAGAT ATAAGTATCT GTCAGCCGGG
CTGAATATCA CCGTCTACTT TCTAAACCAA AGACAAGAAC TGATGTTCTT TAATGCAGTT
GTAAAGGAAT ATAAAAAATC AGGGTATCTG GAAACCTTTG AAGCGTCAAT AACCAGTGAA
TTTACTAAAA TTCAGAGGAG AATGAATTAC AGGCTGGATG CAGTACTTGA CTGCAAGTAT
GCTGTAACCG CTGACCGCCC GTTAACTAAC GAAAAGCCTG AATTTAAAGA ATTAACAGAA
GCCGGGTTTA AAAGTGCACA CACCAAGAAC ATCAGCGGAA ACGGACTATG CCTGATACTG
GACAATACAA TTGATTACGG ACTGCTAGCA GACATCTCTA TAGACCTTGA GGGTATGGGA
AATATACGGG TACTGGCAAA AGCAATCCGT TCCACAACTA TCGAGAATAA AAAGTACGAA
GTAGGCTTAA ATTTTGTTTA TATTTCTCCA CAGGATTCAA GCACTTTGAC AAAATTCATT
TACCATAAAC AACGTATTAT GCTGAAAAAC AACCCTCAAT GCAAAAAATA A
 
Protein sequence
MNANDIIIGT KLEIEIPEYI KSFPSQSSSY ISQLVDVIDE NTITIAAPIS EGRYKYLSAG 
LNITVYFLNQ RQELMFFNAV VKEYKKSGYL ETFEASITSE FTKIQRRMNY RLDAVLDCKY
AVTADRPLTN EKPEFKELTE AGFKSAHTKN ISGNGLCLIL DNTIDYGLLA DISIDLEGMG
NIRVLAKAIR STTIENKKYE VGLNFVYISP QDSSTLTKFI YHKQRIMLKN NPQCKK