| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1251 |
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| Symbol | |
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| ID | 7310046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1550692 |
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| End bp | 1552392 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643608172 |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_002505587 |
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| Protein GI | 220928678 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGGC TATTGATTGT AGATGATGAG GAAATTATTG TAAACGGATT ATATGAGATA
TTCCGAAGCT TAAAAAATCT TGATCTGGAT GTATACAGGG CATATTCGGG CGAAGAGGCG
GTTGAGTGGC TAAGCAGAAC AAGAATGGAT ATTGTTTTAA CAGATATTAG AATGCCGGAA
ATGGATGGTT TGCAGTTATT GGATGTCATA TATAGAAGAT GGCCTCAATG CAAAGTAATA
TTCCTAACAG GGTATAACGA ATTTGAATAT GTATATAAAG CAATTCAGCA CCAGGGTGTA
AGCTATATAC TAAAAACAGA AGATAATGAC AAGGTAATAA GTGTTGTTGA AAATGCCATA
GAGGAGATAA AAAAAGAAAT AAAAACAGAA GACTTGATTC ATAACGCCAA GGAGCAAATT
GAACTTGCGT TGGGTCTCTT CCAAAAGGAT TACTTTATTC ATCTGCTCCA CGAAGAGAAT
TCATCAGATG TAAATAAAGC CCAGTTTGAA CAACTGGCAA TTCCAATGTA CCCTGATCAT
CCTGTAATTC TGCTGCTTGG ACATATTGAC AGCATTCCGG GTAATCTGTC CTACTGGGAT
AAGATACAGT ATATAAATTC TATTAAAGTG ATTATTACTA AAAATCTGAA TACCAATATC
AGGTCCATAT GCATTTTGGA TGATAGATAT AGGTTTATTT TTTTCATACA ACCAAATGAG
CTTATGACAA CAGGTTTCAG TAAAACTGAA GAAAATGCTT TTTATGATAA GGCTATTTCT
TTTGTAAAGG GTACCCTTGA AGTAATACAG ACTGCGTGTA TGGAGTCGTT GAATGCCTCT
ATAAGCTTTT CCCTCAGCGG AGAACCCTGT AACTGGGAAG ACGTATCTAA AAAGTATTTT
TCTCTTAATC AACTGCTGAA CTATAAAATA GGCACAGGGA CAGAAATGCT ATTGATTGAT
AATGAATTAA AAAATAATAT TCTAGCGTCA GGTACAGAAG TACCTGAGCT GGACACAAAT
GATGAGCCAT TGGAAATTCT TTTAAGAAGG AAAAATATGG ACCTAATTCA GCAATACATG
GAGTCTGGCC AAAAAGAAAA ATATTTTGAG GTATTGGAGG AATTATTAAC TCCAATAAAA
TCAGTCAAAA GTAAAAACAG CAATTTAGCC ATTGAAGCAT ATTCCATGGT ATCGCTCAGT
ATCCTTTCAT ATATCAATCG TTGGAAAATA ACGGAGAAAC TGGCATTTCA TATAGGTCTT
AATAGCCTTA TGAGGATTGA CAAACATGAA ACATGGTCAG ATGCAGTAAA GTATCTGATA
AATATATCTG ATATAATATT CCAACTCCAA ACCGACGAAC AGAAGAAGAG GGCGGATAAT
GCAGTTGATT TCGTTCAGAG TTTTATAAAT GAGCATTTGA GTGAAGATCT TTCTTTGGTA
AGACTTGCAG AACAGGTTTA CTTGAACCCA TCATATTTGT CACGCCTCTA TAAGCAGGTT
ACAAATACCA ACCTTTCTGA CTTTATTGAC AACGCCCGTA TAGAGCGGGC AAAAGAGCTT
CTGAAAAAAG AAAAGGTGAA GATAAATGAA GTAGCAAAAG CCGTAGGGTA TGAAACTGCA
GCATCCTTTA CAAGGTTCTT CAAGAAACTA ATGGGGTGTT CTCCACAGGA ATATCATGAT
ACCATGCTGT CAGGTAAATA A
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| Protein sequence | MYRLLIVDDE EIIVNGLYEI FRSLKNLDLD VYRAYSGEEA VEWLSRTRMD IVLTDIRMPE
MDGLQLLDVI YRRWPQCKVI FLTGYNEFEY VYKAIQHQGV SYILKTEDND KVISVVENAI
EEIKKEIKTE DLIHNAKEQI ELALGLFQKD YFIHLLHEEN SSDVNKAQFE QLAIPMYPDH
PVILLLGHID SIPGNLSYWD KIQYINSIKV IITKNLNTNI RSICILDDRY RFIFFIQPNE
LMTTGFSKTE ENAFYDKAIS FVKGTLEVIQ TACMESLNAS ISFSLSGEPC NWEDVSKKYF
SLNQLLNYKI GTGTEMLLID NELKNNILAS GTEVPELDTN DEPLEILLRR KNMDLIQQYM
ESGQKEKYFE VLEELLTPIK SVKSKNSNLA IEAYSMVSLS ILSYINRWKI TEKLAFHIGL
NSLMRIDKHE TWSDAVKYLI NISDIIFQLQ TDEQKKRADN AVDFVQSFIN EHLSEDLSLV
RLAEQVYLNP SYLSRLYKQV TNTNLSDFID NARIERAKEL LKKEKVKINE VAKAVGYETA
ASFTRFFKKL MGCSPQEYHD TMLSGK
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