Gene Ccel_1242 details

Gene Information

• Locus tag: Ccel_1242
• ID: 7312203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 1535348
• End bp: 1537237
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643608163
• Product: Carbohydrate binding family 6
• Protein accession: YP_002505578
• Protein GI: 220928669
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG5520] O-Glycosyl hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.679314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAACAA GTTTTAAAAA AATGTTTAGT GTTTTTGTGG TTTGTTTAAT TGTGTTTTCT 
CTTGTTTTTA CTGTTCCTGT AACAGAGGTT TCAGCCGCAA GTGATGTAAC TGTTAATCTG 
TCAGCGGAAA AGCAGGAAAT GCGTGGTTTT GGTGGAATGG TACACACTGG ATGGCAGTCA 
GATTTAACTG CTGCTCAAAG AGAAACAGCT TTTGGTAATG GAAATGGACA GCTAGGTTTT 
ACTATTTTGA GAATCCATGT TGATGAAAAC AGCAATAACT GGTCCAGAGG AATAGCAACT 
GCTAAAAGTG CTATTGCACA CGGCGGGATA GTTTTTGCCT CCCCTTGGAA TCCTCCGACA 
TCCATGCAGG AAAAATTCAC CCGCAATGGC ACTGCAAATC AGACACGTCT GAAATACGAC 
CAATATGCCG CATATGCTCA GCACCTGAAT AATTTTGTAA AATACATGAA AGACAACGGA 
GCTCCGCTTT ACGCCATATC AGTTCAGAAC GAGCCTGATT ACGCACATAC ATGGACATGG 
TGGACTCCAC AGGAAATGCT GAACTTCATG AAAAACAATG CCGGATCAAT TACAGGTGCC 
AAGGTAATAG CCCCGGAATC ATTCCAATAC TTAAAGAATA TATCAGACCC CATATTAAAC 
GATTCTACAG CCCTTGCTAA TATGGATATT CTGGGAGCAC ATTTCTACGG TACCAGTGTC 
AGCAACATGC CATATCCCCT CTTTCAACAA AAAGGAGCAG GAAAAGAGCT GTGGATGACA 
GAAGTATACG TTCCGAACAG TGACGCTGAC TCGGCAGATC GCTTTCCTGA AGCATTGGAT 
GTTGCGTATA ACATGCACAA TGGTATTGTG GAGGGAAATT TCCAGGCATA TGTATGGTGG 
TATATCCGTA GGTCGTATGG TCCTATGAAA GAGGACGGAA CCATGAGTAA GCGTGGTGCC 
ATGATGGCAC AGTACTCAAA ATTTGTTCGT CCGGGATACG TAAGAGTTGA CGCAACAAAG 
AATCCAAATA CTAACGTATA TATATCAGCC TATAAAGGCG ATGGCAAGGC TGTAATTGTT 
GCAATTAATA AAGGTACTTC AGCGGTGAGC CAAAAGTTTA ATTTACAGGG TGCATCATCG 
GTGGCTAAAG TATCTTCATG GGTAACGGAC GGCAGTAGAA ATGTAGCAGC AGCAACTTCA 
TACACCGGAA CATCTTTTAC AGCTCAGCTT CCGGCTCAAA GTGTTACAAC CTTTGTAGCG 
GATCTTGGAA CCATAACCCC CGTAGAAAAA GATGCTTTTT CCAAATTAGA GGGAGAGTCT 
TATGACGACC AGTCAGGGAC TCAAAACGGG AGCTGCAATG AAGGAGGGGA GTGCCTCGGA 
TACATAGAAA ACGGTGATTA TGCTGTTTAT AAGAATGTTA ATTTCGGAGA AGGTGCACAA 
AGCTTTCAGG CAAGAGTATC AAGTGCTACC ACCGGAGGGA ACATTGAAAT CAGACTGGAT 
AGTCCTAACG GTACTTTAGT AGGTACCTGT CCGGTTGCCG GAACAGGTGA TTGGCAGAAT 
TGGGCAGATG TAACTAGCAA TGTCAGCGGA GTAAGCGGTA AGCATGATTT ATATCTCACT 
TTTACCGGAG ACAGCGGATA TTTGTTCAAC ATTAACTGGT TCAAATTCGA TAAAGCACCG 
ATTGTAACTG GAAAAACAGG TGACATAAAT AATGACGGGC AAATAGATGC TTTAGATTTA 
CTGTTGTTGA AAAAATATAT ATTGGGATTA GATACAATAG AAAATGCGAA ATTAGCCGAT 
TTGGATGCAA ATGGTGAGTT AAATGCTATT GATTTCGCAC TGCTCAAGCA GTATCTGCTG 
GGTTTAATAA CTGTTTTACC TACAGTATAA 

 

Protein sequence

MITSFKKMFS VFVVCLIVFS LVFTVPVTEV SAASDVTVNL SAEKQEMRGF GGMVHTGWQS 
DLTAAQRETA FGNGNGQLGF TILRIHVDEN SNNWSRGIAT AKSAIAHGGI VFASPWNPPT 
SMQEKFTRNG TANQTRLKYD QYAAYAQHLN NFVKYMKDNG APLYAISVQN EPDYAHTWTW 
WTPQEMLNFM KNNAGSITGA KVIAPESFQY LKNISDPILN DSTALANMDI LGAHFYGTSV 
SNMPYPLFQQ KGAGKELWMT EVYVPNSDAD SADRFPEALD VAYNMHNGIV EGNFQAYVWW 
YIRRSYGPMK EDGTMSKRGA MMAQYSKFVR PGYVRVDATK NPNTNVYISA YKGDGKAVIV 
AINKGTSAVS QKFNLQGASS VAKVSSWVTD GSRNVAAATS YTGTSFTAQL PAQSVTTFVA 
DLGTITPVEK DAFSKLEGES YDDQSGTQNG SCNEGGECLG YIENGDYAVY KNVNFGEGAQ 
SFQARVSSAT TGGNIEIRLD SPNGTLVGTC PVAGTGDWQN WADVTSNVSG VSGKHDLYLT 
FTGDSGYLFN INWFKFDKAP IVTGKTGDIN NDGQIDALDL LLLKKYILGL DTIENAKLAD 
LDANGELNAI DFALLKQYLL GLITVLPTV