| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1226 |
|---|
| Symbol | |
|---|
| ID | 7310023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1500922 |
|---|
| End bp | 1501947 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643608147 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002505562 |
|---|
| Protein GI | 220928653 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAA GTATACGGGG CAAATTTAGC GGCAATAACT TTTTGCTGTT CATAACAATA
ATATTATTCT TTGTGTTATA CATATCCGGT ATGGTTATAT TCGCAGACAA GGGCTTTGGA
AAGCCACAGG TTTTTCTAAA CCTGTTTATA AGTAACGCCG GACTGATTAT TGCAGCGGTG
GGTATGACAA TAGTATTGAT TACAGCGGGT ATAGATATAT CCATAGGATC GGTAATAGCT
ATGACGTGTA TGTTGCTGGC ATGGATGATG GAGAAAAAAA GCATGGATGC CTGGGCGAGC
ATAGTAATAG TTTTGGTTGT CGGTGTTGTG TTTGGTCTGG TACAGGGATT TTTAGTATCG
TACCTAAACA TTCAGCCGTT TATTGTTACA CTTGCAGGTC TGTTTTTTGC CAGAGGAATG
ACTGCAATAA TAAGCGACGA GATGATAACA ATTACAAATA AGGCATTTCT TGGCATAGCG
AATGCAAAAA TATATATCCC TTTTATTTCA ACGGTAACAA AGAAGGGAAA AGTAATTCAT
CCATACATAT ATCCCAGCGT AATTCTGGCG ATTGTAGTCT TGATAATTGC TTTCATTGTT
ATGAAATACA CAAAATTCGG CCGTTCAATT TATGCTGTGG GTGGAAATGA GCAATCTGCC
TTACTAATGG GCTTAAACGT CAGAAGAATA AAACTGAAAG TATATGCTCT GAACGGGTTT
CTAGCAGCTT TAGCAGGTTT TGCGTTTGCC CTTAACTCCT GCGGAGGCTT TGTTGAACAG
GCCAGAGGGT TTGAAATGGA TGCTATTGCT TCGGCTGTAA TCGGAGGGAC ACTTCTTACA
GGCGGAGTAG GTAATGTGGT TGGAAGCTTG TTTGGAGTAA TGATAAAGGG TACAATAGAA
TCAATAATAA CATTTCAGGG TACATTGTCC TCATGGTGGA CAAAAATTGC AATAGCGGCC
CTCCTTTGCA TATTTATTAT ACTCCAGAGT ATATTCGCAG CATTAAAGAG AAAGAGGCAG
TTTTAA
|
|---|
| Protein sequence | MIKSIRGKFS GNNFLLFITI ILFFVLYISG MVIFADKGFG KPQVFLNLFI SNAGLIIAAV
GMTIVLITAG IDISIGSVIA MTCMLLAWMM EKKSMDAWAS IVIVLVVGVV FGLVQGFLVS
YLNIQPFIVT LAGLFFARGM TAIISDEMIT ITNKAFLGIA NAKIYIPFIS TVTKKGKVIH
PYIYPSVILA IVVLIIAFIV MKYTKFGRSI YAVGGNEQSA LLMGLNVRRI KLKVYALNGF
LAALAGFAFA LNSCGGFVEQ ARGFEMDAIA SAVIGGTLLT GGVGNVVGSL FGVMIKGTIE
SIITFQGTLS SWWTKIAIAA LLCIFIILQS IFAALKRKRQ F
|
|---|
| |