| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1199 |
|---|
| Symbol | valS |
|---|
| ID | 7310000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1463632 |
|---|
| End bp | 1466283 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643608121 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_002505536 |
|---|
| Protein GI | 220928627 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.842329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC AGCAAAACAT AGCTAAACAA TACGATCCAG GACAGGTTGA GGATCGGCTA
TATAAAAAAT GGATGGATGA AGGTTACTTC CATGCAGTAC CTGACAAGAA CAAAAAACCA
TTTACAATTG TGATTCCCCC ACCCAACATA ACAGGGCAGC TTCATATGGG TCATGCTCTG
GATAATACTC TACAGGACAT TCTCATAAGA ACAAAGAGAA TGCAGGGTTA CAGTGCATTG
TGGCTACCCG GAACCGACCA TGCCAGTATT GCAACAGAAG CAAAGATTGT TGATGCAATG
GCAAAAGAGG GTATATCCAA GGATATGCTG GGACGTGAAA AATTTCTTGA AAAGGCTTGG
GAATGGAAAA AAGTTTATGG TGGCAGGATA GTTGAGCAGC TTAAAAAACT TGGAAGCTCC
TGTGACTGGG AACGTGAACG CTTTACAATG GACGAGGGAC TTTCCAGGGC AGTTCAGGAA
GTTTTCCTGA AGCTTTATGA TAAAGGCCTT ATATACAAGG GAGAAAGAAT TACAAACTGG
TGTCCTAAGT GCAACACCTC AATATCTGAT ATAGAAGTTG AGTACGAGGA ACAGGCAGGC
AACTTCTGGC ATATCAAGTA TCCCGTAAAG GACTCTGACG AATTTGTAAT TATTGCAACT
ACCCGCCCGG AAACTCTTTT GGGTGATACT GCTGTTGCAG TAAATCCTGA GGACGAGAGA
TATACCCATC TGGTAGGGAA AACCTTGATC CTGCCTTTGG TAAATAAGGA AATTCCCGTA
ATAGCCGACT CTTACGTTGA CAAGGAATTC GGTACAGGTT GTGTTAAAAT AACACCTGCT
CATGACCCGA ATGACTATGA AGTTGGGCTT CGTCACAATC TTCCTCAGAT AAGGATAATG
GACGACAATG CCATAATGAA TGACAACGCT GGACAGTACA AGGGTATGGA CCGATACGAA
GCCAGAAAGA AGATGGTAGA AGATCTAGAG AAACTGGGAC TTCTGGTTAA GATTGAACCT
CATTCACACA ATGTAGGCAC TTGTCAGAGA TGTAGGACGG TTGTTGAACC TCTTATTTCT
AAACAATGGT ATGTTCGCAT GAAGCCATTG GCTGAGCCTG CGATAGATGT TGTAAGGAAC
GGAACAATTA AATTTGTACC TGAGAGATTT TCTAAAATAT ACTTTAACTG GATGGAGAAC
ATTCAGGATT GGTGTATTTC AAGACAGCTT TGGTGGGGAC ACAGAATTCC TGCATACTAC
TGTCAGGAAT GTGGGCACAT GATGGTTCAG GGAACTGCTC CTGATACCTG TTCAAAATGC
GGTAGCAATA GAATAGAACA GGACCCGGAC ACACTGGATA CATGGTTCAG TTCAGCATTG
TGGCCTTTCT CAACACTAGG CTGGCCTGAA AAAACAGAGG ACCTGGAATA TTTTTATCCG
ACGGATGTAC TGGTAACAGG TTATGATATC ATATTTTTCT GGGTTGCAAG AATGATATTC
TCTGGTGTGG AGCATATGAA GCAGGAGCCG TTCAAGTACG TATTCATACA TGGTATTGTG
AGAGATTCAC AGGGTAGAAA AATGAGTAAG TCCCTTGGAA ACGGAATAGA CCCTCTGGAG
GTAATAGCTC AGTACGGTAC CGATGCTTTG AGATTCGCTC TTACAATAGG GAACTCACCG
GGAAATGACT TGCGATTCTC ACCAGAAAAG GTTGAATCTG CAAGAAACTT TGCAAACAAG
GTATGGAATG CGTCAAGATT CGTTCTGATG AACTTTGATG AAAACCTTGA TTTCAGCAAG
GTAGACAAGA AGAAGTTCTC TATTGCCGAC AAATGGATTA TGAGCAGGAT AAACACCGTA
ACCAAAGAGG TTAGTGAAAA TATAGAAAAG TTCGAGCTTG GTCTTGGTTT GCAGAAGGTA
TATGACTTTA TATGGGAAGA GTTCTGCGAC TGGTACATCG AGATGGTTAA ACCTAAGCTG
TACGACAGAG AAAGCGAAGG AAGGCTGGAA GCCCAGTATG TTCTCAACTT TGTTCTCAGA
AACGCTATGA AGTTGCTGCA TCCGTATATG CCTTTCGTAA CTGAGGAAAT CTATACACAC
CTGATTAATG ACGGAAGGAG CATAATGATT TCCCAATGGC CGGAGTACAG CGAAGAACTG
AACTTCGCCG AAGATGAAGC AAAAATGACC ATTATCATGG ATGCTATCAG AAGCATAAGA
AATACTCGTG CCGAAATGAA TGTTCCGCCT TCAAGAAAAG CAAAGATTAT ATTTGTTGCA
GCCGGTGAAG AAGAAAAGGC TACTTTGGCA GAAGGAACTT CTTTCTTCCA GAGACTTGCA
AGTGCTTCTG ACGTGACAGT TCAACTGAAC AAGGATGGAA TTCTTTCCGA TGCGGTAGGG
GGAGTTGTAC ACGGTGCAGA AATATTCATT CCTCTTGATG AGCTCATAGA CATTGAGAAG
GAAATAGAAA GACTGGAAAA GGAAAAGAAA AACCTTGAGG GAGAACTAAA AAGAGTAAAA
GGGAAGCTCA GCAACGAGGG CTTTGTTGCA AAAGCTCCAC AGAAGGTTAT AGATGAAGAA
AAGGCAAAGC AGGCCAAGTA CCAGGATATG TATGACAAGG TAGCTGAAAG ACTGGAAAGT
TTAAAAAAGT AG
|
|---|
| Protein sequence | MDEQQNIAKQ YDPGQVEDRL YKKWMDEGYF HAVPDKNKKP FTIVIPPPNI TGQLHMGHAL
DNTLQDILIR TKRMQGYSAL WLPGTDHASI ATEAKIVDAM AKEGISKDML GREKFLEKAW
EWKKVYGGRI VEQLKKLGSS CDWERERFTM DEGLSRAVQE VFLKLYDKGL IYKGERITNW
CPKCNTSISD IEVEYEEQAG NFWHIKYPVK DSDEFVIIAT TRPETLLGDT AVAVNPEDER
YTHLVGKTLI LPLVNKEIPV IADSYVDKEF GTGCVKITPA HDPNDYEVGL RHNLPQIRIM
DDNAIMNDNA GQYKGMDRYE ARKKMVEDLE KLGLLVKIEP HSHNVGTCQR CRTVVEPLIS
KQWYVRMKPL AEPAIDVVRN GTIKFVPERF SKIYFNWMEN IQDWCISRQL WWGHRIPAYY
CQECGHMMVQ GTAPDTCSKC GSNRIEQDPD TLDTWFSSAL WPFSTLGWPE KTEDLEYFYP
TDVLVTGYDI IFFWVARMIF SGVEHMKQEP FKYVFIHGIV RDSQGRKMSK SLGNGIDPLE
VIAQYGTDAL RFALTIGNSP GNDLRFSPEK VESARNFANK VWNASRFVLM NFDENLDFSK
VDKKKFSIAD KWIMSRINTV TKEVSENIEK FELGLGLQKV YDFIWEEFCD WYIEMVKPKL
YDRESEGRLE AQYVLNFVLR NAMKLLHPYM PFVTEEIYTH LINDGRSIMI SQWPEYSEEL
NFAEDEAKMT IIMDAIRSIR NTRAEMNVPP SRKAKIIFVA AGEEEKATLA EGTSFFQRLA
SASDVTVQLN KDGILSDAVG GVVHGAEIFI PLDELIDIEK EIERLEKEKK NLEGELKRVK
GKLSNEGFVA KAPQKVIDEE KAKQAKYQDM YDKVAERLES LKK
|
|---|
| |