| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1191 |
|---|
| Symbol | |
|---|
| ID | 7309994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1455106 |
|---|
| End bp | 1457373 |
|---|
| Gene Length | 2268 bp |
|---|
| Protein Length | 755 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643608113 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002505528 |
|---|
| Protein GI | 220928619 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAT TAATGAAACA TCTTAAACCT CATATAATAT CAATTATTGG CATAGTATTG
TTTTTATTCA TTCAGGCCTA TTGTGATTTG TCTCTGCCTG ACTATATGTC CCATATCGTT
AATGTAGGCA TACAGCAGGG AGGTATTGAA AATGCTGTTC CTGACATAAT CAGAAAAACT
GAGATGGACA AAATAACTTT TCTAATGAAC GATGATGATA AAAAAAATGT TTTGGATAAT
TACGTCTTAA TTGAAAAGGG TAAAGCATCT CAGGAGGATA TGGATAAGTA CTTAAAAAAG
TATCCGGAAA TTAAAAATAA TGATGTATAT AAGCTGAACA CAAGTGACAA TGCAGTTATT
GACAAGATTA ACACAGCAGT AGGTAAGCCG ATGATATTTG TCGGGGCTAT TGAAGGTTCA
ATCAAAATGC CGGATACTTC GTCGGAAAAA AACAGTAATA CGACCGGTGA CAGCCAGATG
AAAAAATTAT TTGCCAATGT ACCCAAGGGA ACTGATCCTT TTACTGTTAT AGCAAAGCTT
CCAAAAGAAC AGTTGGAAGA AATAATGAAA ACGGTAAATG AGAAATTTGA GGGTATGCCC
GACAGTATAA TTACACAGAG TGCAACTACT TATGTAAAAG CTGAGTATAA CACTCTTGGA
AGAGATACGG GAAGTCTTCA ATCCAACTAT ATACTTATTG CAGGTTTAAA GATGCTTTTT
ATATCCCTTA TCAGTATGGT TGCTACTGTT ATAGTTGGTT TGATTGCAGC AAGGGTATCT
GCTGGTGTGG GTAGAAGTAT GAGAAAGAAT GTATTTGAAA ATGTTGTAGG CTTTTCAAAT
GCCGAATTTG ATAAATTTTC AACTTCATCG CTTATTACAA GAAGTACCAA CGATATACAG
CAGGTACAGA TTTTTCTGGT TATGTTGCTA AGAATTGTAT TCTATGCTCC TATATTGGGT
ATAGGCGGTG TATTAAAGGT ATTAAAAACG GATACATCCA TGACTTGGGT TATAGGAGTT
GGGGTTTTAG CCATAATGAT TTTAGTAGCG ATTTTATTCG CTGTAGCAAT GCCTAAATTT
AAAAGTATGC AGAAGCTGGT TGACAGGCTT AACCTTGTAA CACGTGAATC CTTGACAGGT
ATGCTTGTAA TCAGAGCTTT TGGTACGCAG AAGACAGAGG AACAGAAATT TGAACAGGCA
AATACCAATT TTACCAGGAA CAATCTGTTT GTAGGAAGAG TCATGTCAGC TATGTTCCCT
GCAATGATGC TTCTGATGAA TGGTGTTATG ATATTAATAG TATGGGTTGG TGCACACCAG
ATAGATATGG GAAATATGCA GGTTGGTAAT ATGATGGCAT TTATTCAATA TGCTATGCTG
ATTATTATGG CCTTCCTTAT GATATCAATG GTTTCCATAA TTCTGCCGCG TGCATCAGTA
TCAATAACAC GTATAGGTGA GGTTATTGAT ACAAAAGGCT CTATTAAGGA CCCTGCTGCA
TCCGGAAATT TTGTAAAAGA AATGAAGGGG AATGTAGAAT TTAAGAATGT ATCATTTAGA
TATCCTGGTG CAGAGGATGA CGTTATATCT AATGTAAGCT TTACAGCAAA GCCAGGTCAG
ACTACTGCGT TTATAGGAAG TACGGGAAGC GGAAAATCAA CCCTTATCAA CCTTATACCA
AGGTTTTATG ATGTGACTGA AGGACAGATT CTTATTGGCG GAGTTGATAT AAGGGATGTT
TCACAGCATG ATTTGAGACA AAAAATAGGA TATGTTCCGC AAAAAGGTAT TTTATTCTCA
GGTACAATTG AAAGCAACCT TAAATACGGT TATGAGTCAG CTAGCGAGGA AGATATCCGA
ACTGCTGCTG AGATAGCACA GGCTGCGGAT TTTATAAACG AGAAGGAAGA GGGCTTTAAG
ACTGATATTT CACAAGGCGG TACAAATGTA TCAGGCGGAC AGAAACAAAG GCTTTCAATT
GCCCGTGCTC TTGTTAAAAA ACCTGAAATA TTTATATTTG ATGATAGCTT TTCTGCATTG
GACTTTAAAA CAGACGCAGC GTTAAGAAGG GCACTTAAAG AAAAGATAAA AGGTGCAACA
ATACTTGTTG TAGCACAGAG AATAAGCACG GTAATGACTG CGGACCAGAT ACTTGTTCTG
GATGAAGGTC AGGTTGTAGG CATTGGAACT CATAGGGAAC TTATGGAAAC CTGCGATGTT
TATAAACAGA TTGCCTTATC TCAGTTATCA AAGGAGGAAT TGGCATGA
|
|---|
| Protein sequence | MGKLMKHLKP HIISIIGIVL FLFIQAYCDL SLPDYMSHIV NVGIQQGGIE NAVPDIIRKT
EMDKITFLMN DDDKKNVLDN YVLIEKGKAS QEDMDKYLKK YPEIKNNDVY KLNTSDNAVI
DKINTAVGKP MIFVGAIEGS IKMPDTSSEK NSNTTGDSQM KKLFANVPKG TDPFTVIAKL
PKEQLEEIMK TVNEKFEGMP DSIITQSATT YVKAEYNTLG RDTGSLQSNY ILIAGLKMLF
ISLISMVATV IVGLIAARVS AGVGRSMRKN VFENVVGFSN AEFDKFSTSS LITRSTNDIQ
QVQIFLVMLL RIVFYAPILG IGGVLKVLKT DTSMTWVIGV GVLAIMILVA ILFAVAMPKF
KSMQKLVDRL NLVTRESLTG MLVIRAFGTQ KTEEQKFEQA NTNFTRNNLF VGRVMSAMFP
AMMLLMNGVM ILIVWVGAHQ IDMGNMQVGN MMAFIQYAML IIMAFLMISM VSIILPRASV
SITRIGEVID TKGSIKDPAA SGNFVKEMKG NVEFKNVSFR YPGAEDDVIS NVSFTAKPGQ
TTAFIGSTGS GKSTLINLIP RFYDVTEGQI LIGGVDIRDV SQHDLRQKIG YVPQKGILFS
GTIESNLKYG YESASEEDIR TAAEIAQAAD FINEKEEGFK TDISQGGTNV SGGQKQRLSI
ARALVKKPEI FIFDDSFSAL DFKTDAALRR ALKEKIKGAT ILVVAQRIST VMTADQILVL
DEGQVVGIGT HRELMETCDV YKQIALSQLS KEELA
|
|---|
| |