| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1187 |
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| Symbol | |
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| ID | 7309990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1450195 |
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| End bp | 1451076 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643608109 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002505524 |
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| Protein GI | 220928615 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0548059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTAATA AAGCTCCGAG ACTCTCCTTG TATTTTTATA ACAAAGCTCT CAACATTTGT
TTAAAAAATG GTTTGGAAGT TGACTTTATA GATTTGGTGC TGAACATTGC GGTAACCCTA
GATACGCTGG GAAAGCAGGA AGATGCAGTA AAAACATATA ACAAAGTTTT GGAAATGGAT
TCAAATGAGG CCAGAGCATA TTACGGCTTG GCAATAATAT ATGACGAACG GAAGGAATTT
GACAAAGCCA TAGAAATGTA CAAAAAGGCT ATTGAAATAA ATCCTGACTA TTCAAAAGCA
TATTTTTTTC TTGCCAATTC ATGTGATGAG AGTGGGCGAA AAGATGAAGC TGCAGAGTAC
TATGAAAAGG CCGCAGAGCT TGAGCCATAC CACTTCTGGG CATATAATAA TCTGGCTGCC
GTTTACGAAG AAATCGGAAA GTACGATAAA GCCCTGATTG CTATAAGAAA AGGCCTGGAA
CTGGAACCCA ACCATTTCAA GGCACTTTTT AATGCAGGTG TAATTATGAA CAGGCTTGGA
TATACCCAGA AGTCTATAGC GTATTATGAT ACATCTATAG AAAAAAACCC AAGGTATGCA
TACAGCTATT TGAATCTTTC TCTTATCTAT ATGGAGGAAA ACGACATAGA AAAAGCCATT
GAGGTTATAT CTAAGGGGGT AAGATTTAAT CCCGAGGCTT CGTTTCTGTA CTATAACAGA
GCATGTTTCT ATGTTCACAC CGGGAATCTC AACCATGCTT TAGATGATTT AATTACTGCA
ACAGATTTAA GCAGTGAGTT GGAAGAGTAT ATGAAAACAG ATAATGAAAT TGACCCGCTA
AGAGAGATGG AGTTGTACAA AAAAAGATTC GCATATATAT AA
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| Protein sequence | MINKAPRLSL YFYNKALNIC LKNGLEVDFI DLVLNIAVTL DTLGKQEDAV KTYNKVLEMD
SNEARAYYGL AIIYDERKEF DKAIEMYKKA IEINPDYSKA YFFLANSCDE SGRKDEAAEY
YEKAAELEPY HFWAYNNLAA VYEEIGKYDK ALIAIRKGLE LEPNHFKALF NAGVIMNRLG
YTQKSIAYYD TSIEKNPRYA YSYLNLSLIY MEENDIEKAI EVISKGVRFN PEASFLYYNR
ACFYVHTGNL NHALDDLITA TDLSSELEEY MKTDNEIDPL REMELYKKRF AYI
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