Gene Ccel_1180 details

Gene Information

• Locus tag: Ccel_1180
• ID: 7312194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium cellulolyticum H10
• Kingdom: Bacteria
• Replicon accession: NC_011898
• Strand: +
• Start bp: 1444211
• End bp: 1444921
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 643608102
• Product: ABC transporter related
• Protein accession: YP_002505517
• Protein GI: 220928608
• COG category: [V] Defense mechanisms
• COG ID: [COG1131] ABC-type multidrug transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0179573
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCAA TAAACAATCT TACAAAAAGC TATAGTAAGT TTAAAGCGGT TGATGGAGTT 
TCCTTAACTG CAAAACCAGG TGAAATAACT ATACTTCTCG GACCTAACGG TGCGGGTAAA 
TCCACAACAA TTAAGAGTAT TGCAGGACTT TTGAAATTTG AAGGTGAAAT AACAATATGG 
GGTTGCCCCA ATAAAACACT AGATGCAAAG AAAGTGTTCG GATATATACC CGAAACGCCT 
GCTTTGTATG ATCTGCTCAC TCCAATGGAA CACGCAGAAT TTATTGCAAA GGCTTACAAG 
CTAGAATCCG GATGGGAGGA CAAGGCAAGG GCCATATTTG AAAGACTTGA AATTTATGAT 
AAAAAGGATA AATACATCAG GGAGCTTTCA AAGGGTATGA CACAAAAGCT TAGTATTGCT 
CTCGCTTTGC TTATAGAACC CAAAGCTGTC CTTTTTGATG AACCTTTAGT AGGACTTGAT 
CCGAAAGCAA TAAATGAGGT TCTGAAGATA TTAGTGGAGC TTAGATCACA GGAAAAAAGT 
ATACTTGTAA GTACTCATAT AATTGATACT ATCAATGATG TGTGGGATAG AGCTTACATC 
ATGAACAAAG GGAAAATAGT TTCAGAAATT ACAAAAAATG ATTTTAAAGG AAGAGATTTA 
AAAACCATAT TCTTTGAACT CACAGGGGAG GAAGAAGAAT GCAGGCAATA A 

 

Protein sequence

MIAINNLTKS YSKFKAVDGV SLTAKPGEIT ILLGPNGAGK STTIKSIAGL LKFEGEITIW 
GCPNKTLDAK KVFGYIPETP ALYDLLTPME HAEFIAKAYK LESGWEDKAR AIFERLEIYD 
KKDKYIRELS KGMTQKLSIA LALLIEPKAV LFDEPLVGLD PKAINEVLKI LVELRSQEKS 
ILVSTHIIDT INDVWDRAYI MNKGKIVSEI TKNDFKGRDL KTIFFELTGE EEECRQ