| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1177 |
|---|
| Symbol | |
|---|
| ID | 7309982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1440701 |
|---|
| End bp | 1441597 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608099 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002505514 |
|---|
| Protein GI | 220928605 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4152] ABC-type uncharacterized transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0179844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTTAC AAATACGGAA TGTATCAAAA AAGTTTGGAG AAAAGCTTGC TGTCAATGAT
ATTACATTTG AAGTAGGCGA ACCTGGTGTG TTTGGTCTGC TAGGTACAAA CGGAGCAGGA
AAAACCACTA CTATAAGGAT GATATTGAAT ATTGTAAAAA AAGATTCCGG AAGTATATTG
TGGAATAATA AACCCGTTGA AAGGGAGGTT ACCAACTTCG GATACCTTCC CGAGGAAAGA
GGATTGTACC CCAAAGTAAA GGTTGCCGAA CAGCTTATGT ATTTTGCCAG ACTGAGAGGA
ATCAGTTCCG CTAAGGCAAA AAAGGACATA AGTAACTGGT TAGAGAGAAT GGAGGCAAGC
CAATATGCAA ATATGGCAGC AGAAAAGCTT TCCAAAGGGA ATCAGCAAAA AATACAGTTT
ATTGCTTCTA TATTGCATGA TCCCGACCTG ATATTCATGG ACGAGCCGTT CAGCGGACTG
GACCCTGTAA ATACAGAATT GTTTAAGGGT GTAATCCATG AACTGATTAA TAAAAACAAA
TACATAATAA TGTCAAGTCA TCAAATGTCT ACAGTAGAAG AGTTCTGTAG GGACATAGTA
ATTCTTAAAA ATGGCAATAC CGTACTTAAT GGAAATCTTA AAAAAATCAA GCATAGCTAC
GGTAGGAACA ACCTGTTGAT AAATTCGGAA GGAGATATTA TTGAGCTGGC TGCACAGGAG
GGAATTACAA AGGTAAATCG CACTGCGGCA GGATATGAAT TTAAAATATC GAACGAAGAG
CAGGCTTACA GGCTTCTTGA AAAAGTACTT AACAAAAAGC TTATGCTTGA TAAATTTGAG
ATAAGAGAGC CATCACTGCA TGAAATATTT ATAGAAAAGG CTGGTGAAGC AAAATGA
|
|---|
| Protein sequence | MSLQIRNVSK KFGEKLAVND ITFEVGEPGV FGLLGTNGAG KTTTIRMILN IVKKDSGSIL
WNNKPVEREV TNFGYLPEER GLYPKVKVAE QLMYFARLRG ISSAKAKKDI SNWLERMEAS
QYANMAAEKL SKGNQQKIQF IASILHDPDL IFMDEPFSGL DPVNTELFKG VIHELINKNK
YIIMSSHQMS TVEEFCRDIV ILKNGNTVLN GNLKKIKHSY GRNNLLINSE GDIIELAAQE
GITKVNRTAA GYEFKISNEE QAYRLLEKVL NKKLMLDKFE IREPSLHEIF IEKAGEAK
|
|---|
| |