Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_1156 |
Symbol | |
ID | 7309964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | + |
Start bp | 1419980 |
End bp | 1420891 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643608078 |
Product | periplasmic solute binding protein |
Protein accession | YP_002505493 |
Protein GI | 220928584 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTAA ATACACTCTT AAGGACGTTA TTAATAACCT TAGCGTTCTC ATTTATATTA GCCGGCTGTT CTGCAGGAAC GGAAAATACT ACAGAAAATA ATGAAACTAC AATAGTTACT TCATTTTATC CCATGTATAT TTTTACCCAA AACATTGTAA AGGATATACC CGGTATAAAG CTTGAAAATA TGACAGAACC CCAGCAAGGC TGTCTTCACG ATTACCAGAT GGTTCCCGCC GATTTAAAAA CCCTTGAGAA AGCGGACATA TTTGTAATTA ATGGGGCAGG GATGGAAGCT TTTCTGGACA AGGTAATCAA GCAGAGGCCT TCTCTTAAAA TAGTAGAAGC ATCCAAAAAT ATTGAGCTTA TAAAAGACCC AAATGGAGAG AAAAATGCAC ATGTCTGGGT TGGTGTTTCC GGTGCAATAC AAGAGGTCAA AAATATCGCT GAGGGACTTG CTGAGTCAGA CGCAAAAAAT GCCGATGCCT ACAGGAAAAA TGCCTCTGAA TATGTAAAGC AGCTGGGGGC TCTAAAAGAG AAAATGAATA AGGAACTGAA AGAATTCAAG AAGAAGGATG TTATTACCTT CCATGAGGCT TTTCCGTATT TTGCAAAGGA ATTTGGACTA AATATAGTGT CAGTGGTAGA GCGTGAGCCT GGAACGGAAC CAAGTGCGGG AGAGCTTGCT GGACTAATAA ACAAGATAAA AAGTACCAAT GTAAAAATAC TGTTTGCAGA ACCTCAGTAT TCTGCAAAAG CCGCTGAATC TATAGCAAAA CAAACCGATG CAAAGGTTTA TATGCTTGAT CCTGTTGTAA CGGGTGAAAA AAATGCACCT GCTGACCGCT ACATTAAAAC AATGGAAGAG AACCTGAAAG TTTTGGTAAA AGCTTTTAAG GAGAATCAAT AG
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Protein sequence | MKLNTLLRTL LITLAFSFIL AGCSAGTENT TENNETTIVT SFYPMYIFTQ NIVKDIPGIK LENMTEPQQG CLHDYQMVPA DLKTLEKADI FVINGAGMEA FLDKVIKQRP SLKIVEASKN IELIKDPNGE KNAHVWVGVS GAIQEVKNIA EGLAESDAKN ADAYRKNASE YVKQLGALKE KMNKELKEFK KKDVITFHEA FPYFAKEFGL NIVSVVEREP GTEPSAGELA GLINKIKSTN VKILFAEPQY SAKAAESIAK QTDAKVYMLD PVVTGEKNAP ADRYIKTMEE NLKVLVKAFK ENQ
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