| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1119 |
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| Symbol | |
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| ID | 7309931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1377950 |
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| End bp | 1379869 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643608042 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002505457 |
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| Protein GI | 220928548 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.139662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAG CAGAACTTTT AGGCAGATGG ACTAAAGAAA AGTCCGAAGA ACTTTATGGT
ATTAAGAATT GGGGAGCCGG CTATTTTTCT ATATCTGACA ATGGAGAGGT GCTGGTGAAT
CCATACAAGG ATAACGGCTC TGCGGCTGTA AGCCTGATGG ATATAATATC AGGAGTCCGA
GAACGTGGAT TAGACATGCC TGTTCTCCTA CGTTTTGAAA ACTTGCTGGA CTCACAGATT
TCTTTTTTAA ATAATTCATT TAATGAAGCA ATGCACAAGC TTAACTATAA AGGTGCATAC
CGTGGTGTTT ACCCTATAAA GGTAAACCAG CAGCAGCAGG TAGTAGAGGA AGTAACCAGA
TTCGGTCAGA GATACCACCA CGGACTTGAA GTTGGCAGTA AGGCTGAATT GGTTGCAGCA
CTTTCTGTAA TGAAGGATAA GGAAGCCTGT CTTATCTGTA ACGGCTACAA AGACGAAGAA
TTTGTAGATT TGGGTCTTTA TTCCGTAAAA ATGGGTTTTA AATGTTTTTT TGTAATAGAG
ATACCGGGTG AGCTGGATAT AGTACTTGAA CGCTCAAGGG CATTGGGAGT TAAGCCCAAT
ATAGGTATTA GAATAAAGCT TTCTGCAAAG GCGGGAGGAC ACTGGACAGA ATCCGGCGGT
GACCGCAGCA TATTCGGACT CAATATGTCT CAGGTTATTT CAATGGTTGA TAGGTTAAAA
GCAGAGGGAA TGCTTGACTC CCTTAAACTA TTGCACTATC ACCTGGGTTC ACAGATACCC
AATATCAGAG ATATTCGTTC GGCAGTTCTG GAAGCAGCCA GAGTATACGC GGAGCTTGTA
AAAGAGGGTG CACCAATGGG GTACCTTGAT TTAGGCGGAG GTTTGGCGGT AGACTATGAC
GGTTCAAATA CCAATTATAC TAACAGCCGT AACTATACTG TGGAGGAGTA CTGCTCAGAC
ATTGTCGAAG CCGTTATGAC TACCCTTGAT TCAAGCGACG TACCACATCC TGTAATTGTT
ACAGAGTCAG GCCGTACCAC AGTTGCATAT TATTCAGTAC TCATATTCAA TGTACTGGAT
ATTGAGAAAT TTGAAGAGCA TGATATACCT GACAAGCTTG ACGAGAATAC ATCTGAACAG
ATAAGGAACC TGTTCGATGT AAATAAGAGT ATAACACTGA AAAATATACA GGAGTGCTAT
AACGATGCCC TTTACTACAG GGATGAAATA CGTGATATGT TCAAACACGG ACGTATAAGC
CTCCGGGAAC GTGCATTTTC AGAAAAGATA TTCTGGAATA CTATAAACCA GATAGCAAAG
GAAAAACAAA AGTTGAAAAA TGCTCCACCT GACTTGGAGG ATATTGAAAG TGCAATTGCC
GACATTTACT ACTGTAATTT CTCGGTATTT CAGTCAATAC CTGACAGTTG GGCTATAGAC
CAGTTGTTCC CTATAATGCC TTTACACAGA CTATTGGAGT TGCCGAAACG AAATGCCGTA
ATAGCTGATA TAACTTGTGA CTGTGACGGA AAAATAGACC ATTTTATTGA TCTCCACGAT
GTTAGGACTA CACTTCCGCT GCATGAATTT AAAAACGATC AGGATTATTA TCTAGGAGTA
TTTCTGGTAG GTGCATACCA GGAAACATTA GGCGACCTTC ACAATTTATT CGGAGACACA
AATGTTGTTA GTGTAAGAAT AAACGGTGAC GGTACCTACG ATTTTGTTAA GGAAATCCAT
GGTGATAGTG TTTCTGATGT ACTTTCATAT GTTGAATTTG ATCCGAAGAG TATGCTTATA
AGTTTCCGTG AAAAAGCGGA GCAGGCAATC CATGAAGGTT TGATCAGTGC CAGTGAAAGA
CCTGAAATAA TGAGGGCATA TGATAATGGC CTGAGAGGAT ATACCTATTA CGAAAGGTAG
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| Protein sequence | MNKAELLGRW TKEKSEELYG IKNWGAGYFS ISDNGEVLVN PYKDNGSAAV SLMDIISGVR
ERGLDMPVLL RFENLLDSQI SFLNNSFNEA MHKLNYKGAY RGVYPIKVNQ QQQVVEEVTR
FGQRYHHGLE VGSKAELVAA LSVMKDKEAC LICNGYKDEE FVDLGLYSVK MGFKCFFVIE
IPGELDIVLE RSRALGVKPN IGIRIKLSAK AGGHWTESGG DRSIFGLNMS QVISMVDRLK
AEGMLDSLKL LHYHLGSQIP NIRDIRSAVL EAARVYAELV KEGAPMGYLD LGGGLAVDYD
GSNTNYTNSR NYTVEEYCSD IVEAVMTTLD SSDVPHPVIV TESGRTTVAY YSVLIFNVLD
IEKFEEHDIP DKLDENTSEQ IRNLFDVNKS ITLKNIQECY NDALYYRDEI RDMFKHGRIS
LRERAFSEKI FWNTINQIAK EKQKLKNAPP DLEDIESAIA DIYYCNFSVF QSIPDSWAID
QLFPIMPLHR LLELPKRNAV IADITCDCDG KIDHFIDLHD VRTTLPLHEF KNDQDYYLGV
FLVGAYQETL GDLHNLFGDT NVVSVRINGD GTYDFVKEIH GDSVSDVLSY VEFDPKSMLI
SFREKAEQAI HEGLISASER PEIMRAYDNG LRGYTYYER
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