Gene Ccel_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1089 
Symbol 
ID7309904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1342255 
End bp1343289 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content36% 
IMG OID643608013 
ProductFkbH like protein 
Protein accessionYP_002505428 
Protein GI220928519 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3882] Predicted enzyme involved in methoxymalonyl-ACP biosynthesis 
TIGRFAM ID[TIGR01681] HAD-superfamily phosphatase, subfamily IIIC
[TIGR01686] FkbH-like domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGT GCATTGTTTG GGATTTGGAT GATACTGTTT GGGATGGTAC ATTAAAATAT 
AATTATGATG TCAAGGTCAA GGATGATATT TTAAGTACAA TAAAGATGGC AGACCAACTG
GGTATTATAC AGACTATCGC CAGCAGAAAC GATTATTCGG CTGCCATGGA TAAAATAAGG
GAATTGAATA TAGATAAGTA TTTTTTAAAT CCTGAAATAT CGGATAGCTC AAAAGCCGAC
AGTATTAAAA GAATATCCGT TCATTTCAAT ATAAGCCCGG ACAGCATTGC GTTTGTGGAT
GATAATGACT TTGAGCTCTA TGAAGTAAAG AGATTCTTGC CGGAAGTAAT GGTCTATAAT
ATAAAGGATA TACATTTTCT GGAAGCACAA ATAAAGTCCT TAGCCGATAC ATTTCCTTCT
TTATCGAACC ACAGAGAGCT AATGGAAAAG AGAGAAAAAA GGATACAGGC AGAAAAGGCA
TTTATCGGCA CAAGGGAAGA ATTTTTAAAA GAGTGCGGCA TGACCCTTAT AATCCGTACA
TTCAAAGAGA ACGATCTTAA CCGCGTTTTT GAATTGGTAC ACAGGACAAA CCAAATGAAT
AATTTGCAGA CACGATTAGA TCTGGATTCT TTAAAAAAAT ATGGTATGGA TAAGAACAAG
GCTATATTGG TTTGCGAGCT TTCTGATATT TTTGGAGAAC ATGGTATTGT CGGAGCAAGT
CTGTTCAGCT TGAATGGCCG GAAGGCGGTT TTGGACTTAT TCTGTATTTC CTGCCGTGTT
GAAGGAAGGG GTATAGGAAC CGCATTTCTC AACGGTGCCA TGGTTAGTCT GAAAAAGTAT
AAATCTGATA TAAGATGCTT TGAATGTAAT TATGAGAAAA AAGAAAATAA TAAATCCGCA
TACCTGCTCT TAAAGCTTCT GGGATTTGAA ACAAGGGTAA AAACGGGGAA AAAGTTTTTA
CTTCAAATAG CTTCCGAGGA AGTCAAAGAG ATGGTAATTG AATGGTTAAA AATAGTATAT
GGAGAGAACA AATGA
 
Protein sequence
MIKCIVWDLD DTVWDGTLKY NYDVKVKDDI LSTIKMADQL GIIQTIASRN DYSAAMDKIR 
ELNIDKYFLN PEISDSSKAD SIKRISVHFN ISPDSIAFVD DNDFELYEVK RFLPEVMVYN
IKDIHFLEAQ IKSLADTFPS LSNHRELMEK REKRIQAEKA FIGTREEFLK ECGMTLIIRT
FKENDLNRVF ELVHRTNQMN NLQTRLDLDS LKKYGMDKNK AILVCELSDI FGEHGIVGAS
LFSLNGRKAV LDLFCISCRV EGRGIGTAFL NGAMVSLKKY KSDIRCFECN YEKKENNKSA
YLLLKLLGFE TRVKTGKKFL LQIASEEVKE MVIEWLKIVY GENK