| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1078 |
|---|
| Symbol | |
|---|
| ID | 7309893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1333123 |
|---|
| End bp | 1334040 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643608002 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_002505417 |
|---|
| Protein GI | 220928508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAT TGAATAACAT TTTGTATGAC ATGGTCTATC ATAGTGCACC GCTGATTCTT
GCCGTACTGG GAGGATTGTT TGCACACAGG GCAAACGTGC TTAACATTGG ACTTGAGGGT
ATGATGCTTA TGGGTGCCTT CAGCAGCACA CTGTTTGTTC TGGTTACGGG AAGTTTATGG
CTGGGAGTTT TATTAAGTGT TTTATGTACA CTTATATTGG GAATGATTTT TTCATTCTTT
GGAATCACAA TGAAAAGTAA CTTTATTATT ACCGGATTCG GAATTAATAT TTTTGTTGCA
GCCTTGAGTT CCTTTGTTCT TAAATATATG GAAATGGCTA ATATCAATGT CAGCTCTATT
ATTAACACTG CGGGCTTAAA AATCAATATA CCTGTTATCA AAGATATACC TGTATTAAAT
TCACTTTTAA GCGGACACAC AGCTATTACC TATTTAAGCA TTATACTCAT CGCTGTTGTC
AGTGTTATTG TATATAATAC AAAATTCGGT GTTTATGTAA GGGTTGTTGG TGAAAATGAA
GAAGCGGCGA AATCTGTTGG TATCAACAGT GCGGCAATAA AGTACATTGC GGTGCTCATA
GGGGCGACTC TTTGCGCTTT AGCCGGTGCA AATCTGGCAG TTGAAAGAAT GGCCCTGTTT
ACCAACAATA TGACAGCAGG CAGAGGTTTT ATCGCAATAG CCGCTATATA TTGCGGACAA
GCCAAACCGA TAAAGTCAGC ACTATATGCA ATTCTTTTCG GACTTGCAAA GTCCTTGGCT
ATAAACCTGG CCTTGTTTGC AGGACCTATA TCAGGGCTGT TTGAAATAGT ACCATACCTG
ATGATTGTTA TAGTATTGTT TGCGGTTTCG ACTATTGAGA AACGACGTAC AAATATAAGG
GGGTTTAAAC TTGAATAA
|
|---|
| Protein sequence | MSLLNNILYD MVYHSAPLIL AVLGGLFAHR ANVLNIGLEG MMLMGAFSST LFVLVTGSLW
LGVLLSVLCT LILGMIFSFF GITMKSNFII TGFGINIFVA ALSSFVLKYM EMANINVSSI
INTAGLKINI PVIKDIPVLN SLLSGHTAIT YLSIILIAVV SVIVYNTKFG VYVRVVGENE
EAAKSVGINS AAIKYIAVLI GATLCALAGA NLAVERMALF TNNMTAGRGF IAIAAIYCGQ
AKPIKSALYA ILFGLAKSLA INLALFAGPI SGLFEIVPYL MIVIVLFAVS TIEKRRTNIR
GFKLE
|
|---|
| |