Gene Ccel_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1077 
Symbol 
ID7309892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1332028 
End bp1333110 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content37% 
IMG OID643608001 
Productinner-membrane translocator 
Protein accessionYP_002505416 
Protein GI220928507 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA ATAATACACT TTTAAAAAAT ATATCTAATG TTTTATTTCC GGTAATCAGT 
GCCCTTATAT TAGGTGGGAT TCTAATTGCT GCAATAGGTG AAAATCCTTT TTTGACCTAT
TCTGTAATGA TTAAAAAATC TCTCTTCAGT CTGGACGGGC TCTTAAAAAC CTTACACTTT
GCATCACCAT TAATTCTTAC AGGGCTTGCA ATTGCAATAA CCTTTAAGGC AAATATCTTT
AATATGGGTG TTGAGGGTCA GGCAGTGCTT GGTGCATTTT TTGCCGGAGT AGTAGGTTTT
ACTGTAAAGG GATTACCTCC GGTACTCCAC ATAACCTTAT GTGTATTAAC CGGTATTGTT
GTAGGTATGC TTTTTGCACT TGTTCCGGCT TTACTAAAGG CATACTTTAA TGTAAATGAG
ATGGTTGTAA CACTTATGCT CAACTACGTT GTTGTTGAGA TTGTAAAGTT TCTTTCCCAG
GGAGTATTCA AAGACCCATC TTCCGGATAT GTTTCAACCT ATCCGATAGC GGAAAGTGCC
ATGTTTAAAA AAATATTCGA TTCTAATCTG ACTGCATTTT TCTTTATAGC ACTTATAGTT
TTTGCAATAA TGTATGTGGT TTTCAATAAA TCAAAGCTTG GATATGAAAT AAAAGCTATC
GGTAAAAACC CTGAGTTTTC GGAAGCCACG GGTATGAACG TCAGTAAAAA AATTATTATT
ATTATGCTTA TAAGCGGTGC AGTAAGCGGA TTGGCAGGAG CAGGGTTCCT TATGAGTGAG
AAATACAGAT TTACCCTTGA TTTTTCAGGA AGCCCGGGAT TGGGCTGGGA CGGTATGCTC
ATTGCACTTC TTGGTAGTCA TAACCCCATC GGAATACTGG TGGCAGCTGT ATTCTATGCG
GCACTGAAAA CCGGAAGTGA CTATATCGGC GTATTTACCA ATGTTCCCAA AGACATTGTA
GGTGTTATTC AGGGTATTTT GATACTGCTA CTTTCTGTAA AGTTTTTTAA TGAAAAGTTT
CACTTGTTTG AGAAGTTTAA ATTTTTGTGG AAGAAGTCTT CAAGTACAGA CTTAAATAAA
TAG
 
Protein sequence
MKKNNTLLKN ISNVLFPVIS ALILGGILIA AIGENPFLTY SVMIKKSLFS LDGLLKTLHF 
ASPLILTGLA IAITFKANIF NMGVEGQAVL GAFFAGVVGF TVKGLPPVLH ITLCVLTGIV
VGMLFALVPA LLKAYFNVNE MVVTLMLNYV VVEIVKFLSQ GVFKDPSSGY VSTYPIAESA
MFKKIFDSNL TAFFFIALIV FAIMYVVFNK SKLGYEIKAI GKNPEFSEAT GMNVSKKIII
IMLISGAVSG LAGAGFLMSE KYRFTLDFSG SPGLGWDGML IALLGSHNPI GILVAAVFYA
ALKTGSDYIG VFTNVPKDIV GVIQGILILL LSVKFFNEKF HLFEKFKFLW KKSSSTDLNK