| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1045 |
|---|
| Symbol | |
|---|
| ID | 7309867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1300307 |
|---|
| End bp | 1301557 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643607972 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002505387 |
|---|
| Protein GI | 220928478 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA AAGTACGGCT AATATGTAAT TTGAACTGTA GCAGAAGACA GATGGACATG
GTAAAGCTGG AATCCTATCT TTCTGCAAAC GGCTATGAGG TGGTTGAAGA TGAAAAACAG
GCGGATCAAA TTGTTTATAC AACATGTGGT TTTATAAATG AAACGGCCCA AGTGGCATTT
AATGAAATAG AAAGGCTGAA ATCACTGCCT GCTGAGCTTA TTGTTACAGG CTGCCTGCCT
GATACAGATT CTGAAACGTT CAATAAGATA CATAGCGGTA AAGTAGTCCG CAATACAGAA
TTATATAAAT TTGACGATGT TTTCGGAGGA GATACTAAAT TTCAGGATAT CCCTGACGCA
CATGATATGC CATGGGGAAA GGGTGAATAC TTTTGTGTCG AGGTTAGCCG AGGGTGTCCT
GAAAATTGTT CATATTGTGC AACAAAATGG GCTGTTGGAA AAATGAAGAG TAAGCCTATA
CAAAAGTGTA TAGAGGAAAT TGAAGAATTC AAAAAAAGTA CGTTTAGTAA GGTCGTAATT
AATGGTGACA ATGTGGGGGC TTACGGGCTT GATATAAAAG AAACCTTTGG TACATTAGTT
TCAGCTCTGC CAATAGAGGA TGAAAAATAC AAGGCATATA TTGATTCATT GCATCCAAGA
TGGCTATTGC TATATTATGA TGCAGTACTG GCGGCAATAA GCAAAAACCG CTTTGGTATG
CTTGTATCTG CTATACAGGC AGGTAATGAG AGGGTCTTGG AGCTAATGCG GCGTAAAGCA
GATATGAAAA AATTAAAGGA GGCTTTTATT GAAATAAAGC AAAAAAGCCC GGAAATAGTT
TTAGGAACTG AAGTTATTGT AGGATTTCCA ACAGAAAGCG AAAGTGACTT TATCGAAAGT
GTAGATTTTA TTTTAAGTAC AAAATTAGAT TGGGGTAATA TTTTCGCCTT CTCACCGAAA
AAAGGAACCG AGGCTGCGGC AATCAAAGGT CAGGTTGAAG AAGCCGAAAA AATAAGAAGA
ATCAATTATC TGGTAGAAAA GCTCAAGGAA AATGGATATT TTATTTTTAA GGAAGAGAAA
TCACAAGCTG TTATTTTTAG CAATGCCGAT ATTTGCATTA ATGCAGACAA GAGCCCGAAC
CCATATTGGC AGACCTGTTT TGACACTGTT TGTCTTGACA GAAAGAAACA GAATCAAATT
CGTAGCGATT TAAGGGAAGG AAAAATAAAA GTCAGTGAAG TAAGTTTCTA A
|
|---|
| Protein sequence | MSKKVRLICN LNCSRRQMDM VKLESYLSAN GYEVVEDEKQ ADQIVYTTCG FINETAQVAF
NEIERLKSLP AELIVTGCLP DTDSETFNKI HSGKVVRNTE LYKFDDVFGG DTKFQDIPDA
HDMPWGKGEY FCVEVSRGCP ENCSYCATKW AVGKMKSKPI QKCIEEIEEF KKSTFSKVVI
NGDNVGAYGL DIKETFGTLV SALPIEDEKY KAYIDSLHPR WLLLYYDAVL AAISKNRFGM
LVSAIQAGNE RVLELMRRKA DMKKLKEAFI EIKQKSPEIV LGTEVIVGFP TESESDFIES
VDFILSTKLD WGNIFAFSPK KGTEAAAIKG QVEEAEKIRR INYLVEKLKE NGYFIFKEEK
SQAVIFSNAD ICINADKSPN PYWQTCFDTV CLDRKKQNQI RSDLREGKIK VSEVSF
|
|---|
| |