| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1013 |
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| Symbol | |
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| ID | 7309838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1258840 |
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| End bp | 1261941 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643607940 |
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| Product | glycoside hydrolase family 2 TIM barrel |
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| Protein accession | YP_002505355 |
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| Protein GI | 220928446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.188379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAG AATGGGAAAA TCAGTATATA ACACAAATAA ACAGGTATCC GATGCACTCG
CCATATGGAG CTTATGAATC TGTTGAACAG GCCATGAGCT GTAACCGCTG GACTTCAAAA
TATGTAAAAA GCCTGAGCGG GATATGGAAG TTCAAGCTTG CCCAAAATCC ACAGCAGGCA
CCGGAAAATT TCTATGCATT AAATTATGAT GTTTCCGACT GGGATGATAT ACCCGTACCT
TCAAACTGGG AGCTGCATGG GTATGGCAAA CCGGTTTATA CCAATATTAT ATATCCATTT
AAGAGGGAAG GAGTCGGATC GCACTATGAG ATAGAGGTAG CGGAGGGACA GGTAGAGCTT
AATGCACCTC TGGTACCTGA AAAAAACTTG ACAGGCTGTT ACCGAACCGA TTTTGAAGTG
CCGGATTATT TTGAAGGAAA GGATGTATTT ATAGAATTCG GAGGTGTAGA GTCCTGTTTT
TACCTTTGGG TAAACGGTAC GGAAATAGGC TTTTCCAAGG ATAGCAAGCT GGATGCTTCC
TTTGATATCA CACATGCCGT ACATAGTGGA AAAAATGAAC TGGCAGTAAA GGTACTACAA
TACTGTGACG CCTCGTACCT TGAGGATCAG GACTACTGGC ACTTGTCAGG AATATACCGG
GATGTGAGAA TTTATGCAAA GAACAAACAA CGGCTGCTTG ACTACAAGGT AGAAACTCTG
TTTAAGGACA ATAATTTTAA AGAAGCCGAA CTGAGAGTAA TGCTTCAGCC AAATAATAGA
GTCAGGGGTT ATGGAGAATC TTATGTGAGA TTGAGTCTTT ATAACGCTGA AAATGAGTTG
GTGACTGCTT TTCAGAGTCA ACCCTATGCC AAATGCGGAG TATATCTGGA GTCTAAATTT
ACTGCTTTTC CGTCTGCATT TGTGAAAAAT CCCCATTTAT GGTCTGCTGA GGAGCCGTAT
TTATATACTT TGGTTTTGGA GACGGTAGAC AAAAACGGAT GTGTCACAGA TATTGAAAGT
ACAAAAGTAG GCTTCCGTAA AGTAGAAATA GGCAGGGACG GTGTGTTTTA CCTGAACGGC
AGGAGACTAC TGGTGCGGGG AGTGAATTTA CACGAATTCT GTCCCGAAAC TGGAAGATAT
GTTTCGATGG AATATATGAG ACAGCAGATT TTATCCATGA AACAGATGAA TTTCAATGCC
GTTCGAACCA GCCATTATCC CCATGCAAGT GAATGGTATG AGCTTTGTGA TCAGCTGGGA
ATATATGTTG TTGATGAGGC CAATCTTGAA ACCCATGGTT TTGGCGGACA GTTAAGTTCG
TCCGCAGAAT GGACTGCGGC ATACTTGGAA CGTGCTACTC GAATGGTACT CAGAGATAAG
AATCATCCTT CTATTATCAT CTGGTCGCTG GGGAACGAAT CTGGGGCAGG TGCTAACCAT
GCGGCTATGT ATGGTTGGAT AAAAGAATAT GACAAAACAA GGTATGTTCA GTATGAATCC
TGCAACCCTG AAAGCAATAT TACCGATATT ATCTGTGCAA TGTATCCAGC AAAAGACTGG
GTGGAGCAAA AGATGGCAGA GCATGATGAC CTGAGACCCT TCATAATGTG TGAATATGCC
TATGCCAAAA GCAACAGCAA TGGCAATTTT AAACTATATT GGGACTTGGT GGAGAAGTAT
CCACGTTTCC AGGGCGGGTT CATATGGGAC TTTCAAGATA AGGCACTTGT AAAGCAGCAG
GAAAACGGGA CCTCAAGATA TGTATATGCA GGAGCTTTTA ATGAGGAGGT AGTTGACCCC
ATAGAGGATA TGTGTTTGAA TGGAGTGGTG CTGCCGGATT TGGACTGGAA ACCAGCTGCA
TTTGAAATTA GGAATTGCCA GGCCCCGGTG ACAATCTTCC ATGATGGAAG CACATATCCT
GAAGCTGGTG ACTATAAAAT AAAGAATAAC TATATGTTTA AGGATTTGAG TCATTTATAC
CTTACCTGGG AGCTACTGTG TGACGGAAAA ATCGTGGATA GAGGAGTTAT AAAGCAGTAT
TTTACGGCTC CGGGACAGTC GGATATTCTG GAATATGCCT TGAAACCTGA GAAAATATCT
GGTGAAGCTT TTGTAAATAT CACAGTCTCA TTAAATGAGG ATGTACCGTA TGCAAAAAAG
GGACATGTTA TTTATGCATA TCAAATCCCA TTGCAGGAGT CGGTGTTAAA AATGCAGAAG
GTATGTATTA ACCATAATAA ACTGACAATG CATGAAACTG CCGGAGAAAT ATTGATACTG
GGAGAAAATA CTGAGGTTCG TTTTGACAAG GAAAGCTGTA TATTCACAAA AGCTGTTTTT
AACGGAATTG AGAGCTTTTG GGGGGGCCGG GATAATTTTT ACCGGGCTTC AACGGGAATT
GACGAAGGGT GCAGGAATCC CGGCGGCAAT TACTCAACTG ACTGGAAGGA CTGGGGCTTA
AATGATTTGA AAATAAAGGA CATAAAAGTA GATACTGCTG TTTCTGAATC ACAAATATTT
ATATTTACAA ACGTGTCATA CAATGATGAT AAATTGATTG TTTCCACACA GTACAGGATT
GGCAGTAGAG GTATGGAGGT TGATAAAACC GTCATTAATA ATTGTCCCGG TGAGACAATT
CCAAGAATCG GATTCTCATT AATGCTTCCG GAGGATAAAC AGCAAATAAC TTGGTATGGA
AGAGGACCTT GGGAGAATTA CGCCGACAGA AAGGAAGCAG CCCTTATAGG GTGTTACAGC
AGTACCGTCC CGGAACAGTA TACACACTAT GTGAAGCCCG TGGAATGCGG CGGAAAAGAA
GATGTGAGAT ACATCATTGT ACAGGATAAG GGGGGACATG GCCTACGCGT TTCAGGCACC
GTACCTTTCC ATTTTGATAT TCATGATTAC TCTGTGGAGG CCTGCGATAA TGCAATGTAT
GAGCATGAAC TAATAAAGGA TAAATACGTA CACCTAAATA TAGATCATTT ACATGCCGGC
TTGGGCGGAG ACAACGGCTG GTCAAAAAAT ATTCATACGG AGTACCGTAT TGGAAAAGGT
TGTTATCATT ATCAGATATT AATAGAAGTG GTTGACAATT AA
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| Protein sequence | MSREWENQYI TQINRYPMHS PYGAYESVEQ AMSCNRWTSK YVKSLSGIWK FKLAQNPQQA
PENFYALNYD VSDWDDIPVP SNWELHGYGK PVYTNIIYPF KREGVGSHYE IEVAEGQVEL
NAPLVPEKNL TGCYRTDFEV PDYFEGKDVF IEFGGVESCF YLWVNGTEIG FSKDSKLDAS
FDITHAVHSG KNELAVKVLQ YCDASYLEDQ DYWHLSGIYR DVRIYAKNKQ RLLDYKVETL
FKDNNFKEAE LRVMLQPNNR VRGYGESYVR LSLYNAENEL VTAFQSQPYA KCGVYLESKF
TAFPSAFVKN PHLWSAEEPY LYTLVLETVD KNGCVTDIES TKVGFRKVEI GRDGVFYLNG
RRLLVRGVNL HEFCPETGRY VSMEYMRQQI LSMKQMNFNA VRTSHYPHAS EWYELCDQLG
IYVVDEANLE THGFGGQLSS SAEWTAAYLE RATRMVLRDK NHPSIIIWSL GNESGAGANH
AAMYGWIKEY DKTRYVQYES CNPESNITDI ICAMYPAKDW VEQKMAEHDD LRPFIMCEYA
YAKSNSNGNF KLYWDLVEKY PRFQGGFIWD FQDKALVKQQ ENGTSRYVYA GAFNEEVVDP
IEDMCLNGVV LPDLDWKPAA FEIRNCQAPV TIFHDGSTYP EAGDYKIKNN YMFKDLSHLY
LTWELLCDGK IVDRGVIKQY FTAPGQSDIL EYALKPEKIS GEAFVNITVS LNEDVPYAKK
GHVIYAYQIP LQESVLKMQK VCINHNKLTM HETAGEILIL GENTEVRFDK ESCIFTKAVF
NGIESFWGGR DNFYRASTGI DEGCRNPGGN YSTDWKDWGL NDLKIKDIKV DTAVSESQIF
IFTNVSYNDD KLIVSTQYRI GSRGMEVDKT VINNCPGETI PRIGFSLMLP EDKQQITWYG
RGPWENYADR KEAALIGCYS STVPEQYTHY VKPVECGGKE DVRYIIVQDK GGHGLRVSGT
VPFHFDIHDY SVEACDNAMY EHELIKDKYV HLNIDHLHAG LGGDNGWSKN IHTEYRIGKG
CYHYQILIEV VDN
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