| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_1011 |
|---|
| Symbol | |
|---|
| ID | 7312173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 1256230 |
|---|
| End bp | 1257645 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643607938 |
|---|
| Product | glycoside hydrolase family 43 |
|---|
| Protein accession | YP_002505353 |
|---|
| Protein GI | 220928444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC AGGGATTCAA TCCATATCTT CCGTCATGGG AATATATTCC TGATGGTGAA
CCGTATGTTT TTAATAACAG AGTATATGTC TATGGCTCAC ATGACCGTTT TAACGGGTAT
GTATACTGTT TGAACGATTA CGTTTGCTGG TCCGCACCAG TCGATGATCT TGGCAACTGG
AGGTATGAGG GAGTTATTTA CAAAAAGACT GATGACCCTC TCAATCCCGA TGGCAGCATG
TGCCTTTATG CACCTGATGT TACTGTAGGC CCCGACGGAA GGTATTATTT GTACTATGTA
CTTGACAAGC TTCCTATAGT GTCGGTTGCA GTCTGTGATA CCCCTGCTGG AAAATATGAA
TTTTATGGCT ATGTTCACTA TTCCGACGGA ACCCGTCTTG GCGAAAGAGC CGATGATCAG
CCCCAGTTTG ACCCCGGAGT ACTAACTGAA GGTGATAGAA CTTATTTGTA CACAGGTTTT
TGTGCTGTAG GAGATAAGTC AAGAAAAGGG GCCATGGCAA CAGTGTTGGG ACCGGATATG
CTGACAATTG TTGAAGAACC TGTATTCATA GCTCCTAGTC AGCCTTATAG TAAGGGCAGC
GGCTATGAAG GACATGAGTT TTTTGAAGCC CCTTCCATCA GGAAAAATGG GGATACCTAT
TACTTTATAT ATTCTTCGGT TGTATTTCAT GAACTTTGTT ATGCTACAAG CAAACACCCC
ACAAAGGGTT TTGAATATAA GGGAGTTATT GTAAGTAATA GCGATCTTCA TATCGATACC
TACAAGCCTG CCCAAAAACC TATGTTTTAT GGCGCCAATA ACCATGGAAG TATAGTTGAA
ATTAATGGTA AATGGTATAT TTTTTACCAC AGGCATACCA ATGGAACAAA TTTCAGCAGG
CAAGCCTGTT GCGAACAAAT TGAAATTCTG GAGGACGGCA CTATTCCACA GGTAGAAATG
ACCTCCTGCG GATGCAACGG AGGGCCGTTG GAAGGACGCG GTGAATACGC CGCCTATCTG
GCATGCAACT TGTTCTGCGA AGAAGAGTCG TTATATACTG ATTGGACAGC CTCATGGATG
AACAATCAGT TCCCAAAAAT AACTCAAGAC GGAAGAGATG GAGACGAAGA AATCGGTTAC
ATTGCCAACA TGAAGGCTTC TGCCACAGCT GGCTTCAAAT ATTTTGACTG TAAGGGAATT
AAAAAGGTTA AAATCAAGGT ACGCGGATAC TGTCAAGGTG ACTTTGAAGT AAAAACCGCA
TGGGATGGTC CGGCCCTTGG AAAGATATCG GTAGGTTTTA CCAATGTATG GAAGGAGTAT
TCTGCCGACA TAGTCATTCC CGACGGAGTA CAAGCACTGT ATTTCACATA TACGGGCCAG
GGTAGTGCAA GCCTTGCTTC TTTTACACTG GAATAA
|
|---|
| Protein sequence | MKKQGFNPYL PSWEYIPDGE PYVFNNRVYV YGSHDRFNGY VYCLNDYVCW SAPVDDLGNW
RYEGVIYKKT DDPLNPDGSM CLYAPDVTVG PDGRYYLYYV LDKLPIVSVA VCDTPAGKYE
FYGYVHYSDG TRLGERADDQ PQFDPGVLTE GDRTYLYTGF CAVGDKSRKG AMATVLGPDM
LTIVEEPVFI APSQPYSKGS GYEGHEFFEA PSIRKNGDTY YFIYSSVVFH ELCYATSKHP
TKGFEYKGVI VSNSDLHIDT YKPAQKPMFY GANNHGSIVE INGKWYIFYH RHTNGTNFSR
QACCEQIEIL EDGTIPQVEM TSCGCNGGPL EGRGEYAAYL ACNLFCEEES LYTDWTASWM
NNQFPKITQD GRDGDEEIGY IANMKASATA GFKYFDCKGI KKVKIKVRGY CQGDFEVKTA
WDGPALGKIS VGFTNVWKEY SADIVIPDGV QALYFTYTGQ GSASLASFTL E
|
|---|
| |