| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0990 |
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| Symbol | |
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| ID | 7309820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 1218539 |
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| End bp | 1220878 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643607917 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002505332 |
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| Protein GI | 220928423 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATCA GTCATTTAAG AAAAATATTC AAAGTACTAT CTGTCAGAGC CTCAAAAAAA
TATCTTCTGA AATATTTTAT TACTTATTTT GCAGTTTTAA TTGTACCTCT AATAATAGGT
TATGCATATT ATGTAAACGC ATACAAAATC GTTTATTCTG ATGCCATAAA TGAAAATAAT
GCAATTCTCA GACAGGCCTC TTCTATTCTG GAACAGAGGT TTGGTGAGGC TGATTCCATG
GCGAATCAGA TTGTTACAAA CAGTAATGTT AATGCGTTTC AGGGTATCCA TGATCCCTTA
AGATATCCTA ACTCATATTC TATAATAAGA ACACGTAATA GCCTTACTAA TTACAATACT
TCCAATAAAT TTGTGTGGAA TTATTTCATC TTTTTTAACA AAAGTGAAAT GGTAATGAAC
AACGAGATTT CCTATACTTA TGAGCAATTT TACAAAAGGT ATATGAGTTT TAAAGGGATA
CCCTATGAAA AGTGGTACCG CACAATAACT GAAAACCTTT GCGAAGGCGG CCTTTCGGAA
GAAATTGGGG CAGAGCTGTA TAATTATACG CCTTCCGGTA CTGTTGGTAT GACGATAGTT
ACCTATTCAA AGCCCTTAAT TTCTTATGGT CAAAATGATG GTTTCGTCAT GCTGGTAATA
AATAAAAAAG AAATATCCGA ACTTTTATCC TCTATAAATA CCGATAACGG CGGAGTAACA
TACATAGAAA ACAATGACGG TAAAATCATA ACCTACTTTT CTGGTGAAAA ATGTGATATC
CAGGCTGTAC AAGCCTCAGT AAATAAGAGC TTTACGGGAT CCGAAAATTC TTCCGAGATA
TCTATCAACG GTAAGAAAAT GATGGTTAAC TACATTAAAA CAAATAATGA CGGGTTCAAG
TATGTAGCTG TCCAATCAAA AAAAGTTGTA CTGGAGAAGG CTAACAATCT TAAAGTAATT
ATTTATGTAG TGCTGCTTAT TTCTATTTTG CTGGGTACTC TCATTTCTTA TTATATGGCA
AAAAGAAGTG CAAAACCTTT ACAGGATATA TTAAACAATA TACAAATCAG CGAAATCAGC
GAAGATGCTT TTAAAAATAT CAAGTATACC TTAAGTGAAC TAGGTAATAA CAACAGAAAT
TTAAAAAGAA CCATTGACGA ACAGATCCCT ATTTTAAAAA CAACTTTTCT TACAAGACTT
ATAAACGGGG AGTTCAATTC ACAGGAGGAG ATAGGAAAAA TTGCCAGATG TATCCGTTTG
AATTTTAAAA ATAGTGTATA CTGCACTGTT ATATTCAAAT TTGATACCGA TGTAAATAAT
TATGATACTC TGGAATTGAC AATTGTAAAT TCATTTAAGC AGTTATTGAG GGAAATACTC
GGCAGGGTTG TACCTGACGC CCTTATTTGT GATCTGGATG AGCAACAATT GGTAATGCTT
GTTGTTTATC CTGCCTCGCA GAAGGGACAG CTCAATCCTT ATATTGAAGA TATGGCGGCC
AGGTTGAAGC AGGAAATGCC TAAAAATCTA TTTGAAAGTC TTTTAATCTC CTGCGGCAAT
ATTGTAGATC AGCTGAATGA TATACCCATT TCTTTCGAAA ATGCAAAGCT GGCCTTCAAA
ATTAACTCTG CCAATAGGCA TAGTAATATC CTGTGGTATG CTGGTACAGG AAATTATACG
GTTAATTACT ATTTCCCTAC CGATTTGCAG ACAAAGCTTA TAAATAATGT TAAGGCAGGC
GATAAAGGAG CTGTTAAATC CATCCTCAAT CTACTCTTTA ACAAGAATTT TATTGATTCA
AACCTTTCAA CGTCACTGCA TAAACTATTT ATTTACGAGC TTTTGGGTAT TATCATTAAA
TTGTGGAATC AGATTGGCTT TGATGAAAAG ACCTACAATT ACATCATAAG CAATACCGAC
AATATTGACA AATATAGCGA ACTTAAGCAG ATAAAAATAA TAACAGATTC TTATTACATG
CTTTGTGAAA TAATAAATGG ACAATCGGAC AAACAGTACT TAAATACCAA TAATCAAATA
ATTGAGTACA TCAACGAATT TTACCATGAT TGTAATATAT CTCTTGCTTC TATAGCAAGC
CAATTTAACA TGAACGAATC TTATTTGTCA TATATATTCA AGCAGCAAAG TGGTATCAAG
CTGTCATCGT ATATTGAGAA TTTAAGGATT CAGAAGGCCA AAGAGCTGTT GAGAAGTACT
GCCTTACCTA TAAGTGAAAT TGCAGTAAAA ACAGGTTATT TTTCTACAAA CACCTTTTGC
CGAGCTTTCA AAAGAGTTAC TGGTATAAAT GCAACAACGT TCAGAGGAAG TAATGCGTGA
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| Protein sequence | MIISHLRKIF KVLSVRASKK YLLKYFITYF AVLIVPLIIG YAYYVNAYKI VYSDAINENN
AILRQASSIL EQRFGEADSM ANQIVTNSNV NAFQGIHDPL RYPNSYSIIR TRNSLTNYNT
SNKFVWNYFI FFNKSEMVMN NEISYTYEQF YKRYMSFKGI PYEKWYRTIT ENLCEGGLSE
EIGAELYNYT PSGTVGMTIV TYSKPLISYG QNDGFVMLVI NKKEISELLS SINTDNGGVT
YIENNDGKII TYFSGEKCDI QAVQASVNKS FTGSENSSEI SINGKKMMVN YIKTNNDGFK
YVAVQSKKVV LEKANNLKVI IYVVLLISIL LGTLISYYMA KRSAKPLQDI LNNIQISEIS
EDAFKNIKYT LSELGNNNRN LKRTIDEQIP ILKTTFLTRL INGEFNSQEE IGKIARCIRL
NFKNSVYCTV IFKFDTDVNN YDTLELTIVN SFKQLLREIL GRVVPDALIC DLDEQQLVML
VVYPASQKGQ LNPYIEDMAA RLKQEMPKNL FESLLISCGN IVDQLNDIPI SFENAKLAFK
INSANRHSNI LWYAGTGNYT VNYYFPTDLQ TKLINNVKAG DKGAVKSILN LLFNKNFIDS
NLSTSLHKLF IYELLGIIIK LWNQIGFDEK TYNYIISNTD NIDKYSELKQ IKIITDSYYM
LCEIINGQSD KQYLNTNNQI IEYINEFYHD CNISLASIAS QFNMNESYLS YIFKQQSGIK
LSSYIENLRI QKAKELLRST ALPISEIAVK TGYFSTNTFC RAFKRVTGIN ATTFRGSNA
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