| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0964 |
|---|
| Symbol | |
|---|
| ID | 7309795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | + |
|---|
| Start bp | 1149074 |
|---|
| End bp | 1151299 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643607891 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002505306 |
|---|
| Protein GI | 220928397 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1201] Lhr-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATA ATGATGCTTT TTACAGACTT GCTCCATTTA TAAGAGAATA CATCTATACG
CATGGTTGGA CGGAGTTAAG AGATGTACAA CTGGAAGCGT GCAAAGTAAT ATTCGATACA
GACGACCACC TTTTACTTGC AGCGGGTACA GCCTCAGGAA AAACTGAGGC GGCCTTCCTG
CCTGTCTTGA CTCAACTACA TGAAAAACCT TCTTCTACAA TTGGAGTGCT ATATATAGGC
CCGCTTAAGG CACTCATAAA TGACCAGTTC CTGCGTTTGG ATGATCTTTT AAAGGAAGTT
GATATTCCCG TATGGCATTG GCATGGAGAT GTATCGCAGA GCCATAAGAA TAGGTTTATG
AAAGATCCAA GAGGAATTCT ACAAATAACA CCTGAATCTC TGGAAAGTAT GATTATCAAC
AGAGATAATG AAATTTCACG TATTTTTGGA GATTTGAGGT TTATTATTAT AGACGAAGTA
CACGTATTTA TGGAGAGTGA CCGTGGACGT CAAGTTTTAT GTTTGCTGGA ACGCTTGTCT
CGCTACTTTG AAAAAGAGCC CAGAAGGATA GGCCTATCAG CTACACTTGG TGACTATTCG
CTAGCTGAAA AATGGCTGGG TTCGGGTACT AAGCGCCGGG TCGCTACACC TAAAACAGAA
ACTTCTCAAC AAAAAATACG ACTGGCTGTT GAGCATTTTT ACATATCTGA CCCTATAGAC
AGTAAAAGTA AGCTCACCAT CAGCTCTAAA GATGAAGTAA AGGAACAAAA CCTTACGACA
GACAAGTACT ATGAATATAT TCATAGTAAA TGTAAAGCTC AAAAATGCCT TATATTTGCA
AATAACAGAA CTGAAGCGGA GCAAGTAATA ACGAATCTTC GGCAGATAGC GAAAGCAAAA
AGCTTACCCG ATATATACCA TGTGCATCAC GGCAGTATAT CGGCGTCATT AAGGGAAGCT
GCAGAACAGG CAATGCGTGC TCAGGATCAT CCGGCTGTAA CAGCAGCTAC TGTTACTCTT
GAATTGGGAA TTGACATAGG ACATCTTGAA AGGGTAATTC AATTGGGAGC ACCGTTTTCT
GTATCAAGCT TTCTGCAAAG GCTGGGGCGT TCAGGAAGGA GAGGTTCTCC TCCAGAGATG
TGGTTTGCCT GCTATGAGGA AGCTTCTATG GATAAAGGAG CACTGCCTGC TCAAATACCG
TGGCAGCTTA TTCAGACGAT TGCAATAATA CAGTTGTACT TGGAGGAAAG GTGGATAGAG
CCAATTGAGC AAAAAAAGTG TCCCTTCAGT CTTATGTATC ATCAGATTAT GAGTATATTG
ATTACTAAGG GAGAACTTTC GCCTGCTGCA CTGGCACAGA AGGTATTGAC TCTCTCTCCG
TTTAAAGAAG TATCTCAGGA AGATTTTAAA GAATTGCTTA GACATTTGAT TAAGATAGAC
CATATACAAC TGACAGAGCG AAAGGGTTTA ATAGTTGGAC TGGCAGGAGA GCAGCTGGTA
CGAAGCTTCC GCTTCTATGC TGTATTTGCG GAAAATGTAG AATACACTGT AAAAGATGAT
ACAAGCGAAA TAGGAAGTAT AATAAATCCA CCGCCGCCGG GTGAAAGGTT TGCTTTGGCA
GGAAATACTT GGGTTGTTGT TGAAATTGAT CCCAAAAATA AGATAGTCTA TTCCAAAAAA
GTAAATGGTA GGGTACGCAC ATATTGGTCT GGCGGTGGAG GCGGAATACA TATAAAGCTT
CTACAAAGGA TGAGGAAGGT ACTTTTTGAG GAAAAGGTTT ATCCTTATCT CAAAGAGAAG
GCTAAAGAAA GGCTACAAAT AGCAAGAGAT TTTGCTAGGC GGACAGAATT AGACAAGAAA
AGCATATTTT ATGCGGGTAA TAATGAATAT TATATTTTCC CATGGATGGG GACTAATGAA
TTCCGTACAC TTGACAGGTG GTTGCGCGTA CAGTGCAGCG ATGTAGCAAA AATCAGAAAT
ATAGGAGGCT TGCCGCCTTA CTACCTAACG ATTCAGTCAG ATGTGAGCAA CAGTGAGGAG
CTTCTACAGG TAATCACTAA TATGGCAGAA AGAGAAATTT CACCATATGA TTTAGTTGGG
GAAGAGGATG CTCCGCAGCT TCAGAAGTAT GATGAATTTA TACCACATAA TTTATTAAGA
AAAGCTTTTG TTACAGATTA TTTAGACATA AGGGCTATGA AAGGGCTTAT AGGTGATTGG
AAATAA
|
|---|
| Protein sequence | MTNNDAFYRL APFIREYIYT HGWTELRDVQ LEACKVIFDT DDHLLLAAGT ASGKTEAAFL
PVLTQLHEKP SSTIGVLYIG PLKALINDQF LRLDDLLKEV DIPVWHWHGD VSQSHKNRFM
KDPRGILQIT PESLESMIIN RDNEISRIFG DLRFIIIDEV HVFMESDRGR QVLCLLERLS
RYFEKEPRRI GLSATLGDYS LAEKWLGSGT KRRVATPKTE TSQQKIRLAV EHFYISDPID
SKSKLTISSK DEVKEQNLTT DKYYEYIHSK CKAQKCLIFA NNRTEAEQVI TNLRQIAKAK
SLPDIYHVHH GSISASLREA AEQAMRAQDH PAVTAATVTL ELGIDIGHLE RVIQLGAPFS
VSSFLQRLGR SGRRGSPPEM WFACYEEASM DKGALPAQIP WQLIQTIAII QLYLEERWIE
PIEQKKCPFS LMYHQIMSIL ITKGELSPAA LAQKVLTLSP FKEVSQEDFK ELLRHLIKID
HIQLTERKGL IVGLAGEQLV RSFRFYAVFA ENVEYTVKDD TSEIGSIINP PPPGERFALA
GNTWVVVEID PKNKIVYSKK VNGRVRTYWS GGGGGIHIKL LQRMRKVLFE EKVYPYLKEK
AKERLQIARD FARRTELDKK SIFYAGNNEY YIFPWMGTNE FRTLDRWLRV QCSDVAKIRN
IGGLPPYYLT IQSDVSNSEE LLQVITNMAE REISPYDLVG EEDAPQLQKY DEFIPHNLLR
KAFVTDYLDI RAMKGLIGDW K
|
|---|
| |