Gene Ccel_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_0888 
Symbol 
ID7309730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp1065311 
End bp1065850 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content38% 
IMG OID643607825 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002505240 
Protein GI220928331 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000118183 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG GTGAAAAAAT AAAACAGCTA AGAGTAAAAA ATGGTCTTAC ACAAGAAGAA 
CTTGCCGGAA GGTGTGAATT ATCAAAAGGC TTTATATCAC AGCTTGAGAG AGATCTGACT
TCTCCGTCAA TTGCTACTTT GATGGATATT CTTGAATCGC TGGGAACCAA TATAAAGGAC
TTCTTTAATG AATCTGTCAA TGAAAAGGTT GTCTTTAAAA AAGATGATGT TTTTACCAAA
GAAGATAGAG ATTTGGGCTA TGTAATACAT TGGCTTGTTT CAAATGCCCA GAAAAATACC
ATGGAGCCTA TTCTTATGAA ACTGGACCCA GGAGGCAGTT CAGAGCTGGA TAACCCACAT
GACGGTGAGG AATTCGGGTA TGTTGTCAGC GGCGGTGTAA TTGTTTTTCT GGGTGCACAG
AAATACAAGG TAAAAAAAGG CGAATGTTTC TACTTTAAAC CTGTTACAAT CCATAAAATA
GTTAATGCCG TTAAGAGTCA GTCCGTTATT CTATGGGTAT CATCACCGCC TAGTTTTTAA
 
Protein sequence
MKIGEKIKQL RVKNGLTQEE LAGRCELSKG FISQLERDLT SPSIATLMDI LESLGTNIKD 
FFNESVNEKV VFKKDDVFTK EDRDLGYVIH WLVSNAQKNT MEPILMKLDP GGSSELDNPH
DGEEFGYVVS GGVIVFLGAQ KYKVKKGECF YFKPVTIHKI VNAVKSQSVI LWVSSPPSF