| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_0886 |
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| Symbol | |
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| ID | 7309728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | + |
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| Start bp | 1063678 |
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| End bp | 1064310 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643607823 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002505238 |
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| Protein GI | 220928329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000283425 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCTGG TATTATTATT ATTGGAGGGA ATGGTAGTTT CTTTGCAGAT ATTTGCACTT
ACGCTTATAT TTGCAATACC TTTAGGGCTT GTTATTTCCT TTGGGAGAAG GGCAAAACAC
ATAATTATTA GCGGAGTAAC AAGTATTTAT ATCTCAATAA TGAGAGGAAC GCCATTAATA
CTGCAGCTGC TGGTTGTCTA TTTTGCACCT TCTTATGTAT TTGATGCAAA AGTTGGTAGA
TTTACGGCTG CCGTTATTGC ATTTATACTC AATTATGCGG CTTATTTTGC TGAAATATTC
AGAGGCGGAA TAGAGTCTAT ACCCAAAGGA CAATATGAAG CGGGAGAAGT TCTGGGATTT
ACAAAACTAC AGGTATTTTT TAAGATAATT CTGCCGCAGG TGATAAAAAG GGTATTACCT
CCTATCAGTA ATGAAGTAAT AACCCTTGTC AAGGATACTG CACTTGTAAC AGTAATCGGT
GTAGAGGAAA TGTTCAGGAT TGCCCAGAAT GCTTCAAGCA GGGTATCATC GGTGCGACCG
TTATTTGTTG CCGGAGCCTT CTATTATGTA ATGAATCTTA TTGTGGCTCA GGTGTTTACA
TTTGCGGAGA AAAAGCTTAA TTACTATAGA TAG
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| Protein sequence | MKLVLLLLEG MVVSLQIFAL TLIFAIPLGL VISFGRRAKH IIISGVTSIY ISIMRGTPLI
LQLLVVYFAP SYVFDAKVGR FTAAVIAFIL NYAAYFAEIF RGGIESIPKG QYEAGEVLGF
TKLQVFFKII LPQVIKRVLP PISNEVITLV KDTALVTVIG VEEMFRIAQN ASSRVSSVRP
LFVAGAFYYV MNLIVAQVFT FAEKKLNYYR
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